RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 AQP11Q8NBQ7 271 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 C7orf57Q8NEG2 295 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 GPR32P1Q8NGA4 272 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 OR4E2Q8NGC2 313 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 OR8K5Q8NH50 307 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 FAM81AQ8TBF8 368 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ADAMTS18Q8TE60 1221 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 UTP15Q8TED0 518 aaKnown RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 APH1BQ8WW43 257 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 S100ZQ8WXG8 99 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 RERGQ96A58 199 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 PPP1R14BQ96C90 147 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ELP4Q96EB1 424 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 YIPF6Q96EC8 236 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CNRIP1Q96F85 164 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 VMP1Q96GC9 406 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 COL21A1Q96P44 957 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 OR2A14Q96R47 310 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 OR2A5Q96R48 311 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ZFYVE21Q9BQ24 234 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 FUZQ9BT04 418 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 COPS4Q9BT78 406 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CDCA4Q9BXL8 241 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ITPAQ9BY32 194 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ACTRT3Q9BYD9 372 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 UCK2Q9BZX2 261 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CCDC90BQ9GZT6 254 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SMOC1Q9H4F8 434 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SERHL2Q9H4I8 314 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 UCK1Q9HA47 277 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CACYBPQ9HB71 228 aaKnown RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 FZD3Q9NPG1 666 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 POLE3Q9NRF9 147 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CLN6Q9NWW5 311 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 KLHL28Q9NXS3 571 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SPHK1Q9NYA1 384 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 FTSJ1Q9UET6 329 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SUSD2Q9UGT4 822 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SATB2Q9UPW6 733 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 RNF6Q9Y252 685 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 IFT52Q9Y366 437 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SLC22A7Q9Y694 548 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 DMXL1Q9Y485 3027 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 A0A0J9YY10 115 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SPTY2D1-AS1A0A0U1RR47 76 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 A0A1W2PPW3 197 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SH3PXD2BA1X283 911 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SNTNA6NMZ2 147 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PATE3B3GLJ2 98 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 BTN3A3O00478 584 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 CDX4O14627 284 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 FFAR1O14842 300 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TM4SF5O14894 197 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 BCAT2O15382 392 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 XPNPEP2O43895 674 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 BCAS1O75363 584 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 VIPP01282 170 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 WNT1P04628 370 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ATP1B1P05026 303 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 HMGN2P05204 90 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 INHBBP09529 407 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OR12D1P0DN82 309 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 UGT2B7P16662 529 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF12P17014 697 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ELAVL4P26378 380 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 FMO3P31513 532 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ID4P47928 161 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 MAN2A2P49641 1150 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 LIM2P55344 173 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 CLDN2P57739 230 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 RACK1P63244 317 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 UBE2IP63279 158 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 GPLD1P80108 840 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OCA2Q04671 838 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PTGES3Q15185 160 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SF3A2Q15428 464 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 CTF1Q16619 201 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 DGUOKQ16854 277 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ZSWIM7Q19AV6 140 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 RSPO4Q2I0M5 234 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TMEM44Q2T9K0 475 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 FAM214AQ32MH5 1076 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 EIPR1Q53HC9 387 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 FGD3Q5JSP0 725 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 HEPHL1Q6MZM0 1159 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 CDC73Q6P1J9 531 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 KLHL35Q6PF15 583 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 KLHL17Q6TDP4 642 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 DBX2Q6ZNG2 339 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PRR23CQ6ZRP0 262 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 Q6ZSR6 202 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 IQCHQ86VS3 1027 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OOSP2Q86WS3 158 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PLD3Q8IV08 490 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OR2L13Q8N349 312 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SMYD1Q8NB12 490 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OR4K14Q8NGD5 310 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 OR8J1Q8NGP2 316 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 BAHD1Q8TBE0 780 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TBC1D15Q8TC07 691 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms