RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 ARID1AO14497 2285 aa14.39□□□□□ -0.11
ERGIC3-217ENST00000488935 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 EXOC1LA0A1B0GW35 172 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 A0A1W2PNV4 684 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 OR6C70A6NIJ9 312 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 ULK1O75385 1050 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 TNFSF13O75888 250 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 KRT6AP02538 564 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 KRT6BP04259 564 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 JUNP05412 331 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 RHOXF2BP0C7M4 288 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 CD53P19397 219 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 IL12BP29460 328 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SRD5A2P31213 254 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 RFX3P48380 749 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 KRT6CP48668 564 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SUCLG1P53597 346 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 CLDN15P56746 228 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 DCAF7P61962 342 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF155Q12901 538 aaPredicted RBP14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SNTA1Q13424 505 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 P4HA3Q7Z4N8 544 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 OR4K17Q8NGC6 315 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF675Q8TD23 568 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 WNT2BQ93097 391 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 MBD6Q96DN6 1003 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SLC35A4Q96G79 324 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 BTBD9Q96Q07 612 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 TM9SF2Q99805 663 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 PIGQQ9BRB3 760 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SFXN3Q9BWM7 321 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 SLC35C2Q9NQQ7 365 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 NMRK1Q9NWW6 199 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 KLHL28Q9NXS3 571 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 PRR14LQ5THK1 2151 aa14.38□□□□□ -0.11
ERGIC3-217ENST00000488935 A0A087WUV0 522 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 A8MXE2 369 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 UBFD1O14562 309 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SEC14L5O43304 696 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 CDH16O75309 829 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF708P17019 499 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 HK1P19367 917 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 TIA1P31483 386 aaKnown RBP eCLIP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 KRT20P35900 424 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 MC3RP41968 323 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SORDQ00796 357 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ACSM2AQ08AH3 577 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 C2orf80Q0P641 193 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 RASA2Q15283 850 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ERCC6LQ2NKX8 1250 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SPDYAQ5MJ70 313 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 C10orf62Q5T681 223 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ACSM2BQ68CK6 577 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ANKRD34AQ69YU3 496 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 TMEM107Q6UX40 140 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF550Q7Z398 422 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 BTLAQ7Z6A9 289 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 GALNT10Q86SR1 603 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SMPDL3BQ92485 455 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 STARD4Q96DR4 205 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ZC3HAV1LQ96H79 300 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 WFIKKN1Q96NZ8 548 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 BBS4Q96RK4 519 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF382Q96SR6 550 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SHCBP1LQ9BZQ2 653 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 TNFRSF12AQ9NP84 129 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 SENP1Q9P0U3 644 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF180Q9UJW8 692 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 NFU1Q9UMS0 254 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 OR10H1Q9Y4A9 318 aa14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 POLR3HQ9Y535 204 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-217ENST00000488935 OPN1LWP04000 364 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 ANXA4P09525 319 aaPredicted RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 DRD2P14416 443 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 TAC1P20366 129 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 IMPDH1P20839 514 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 HOXC12P31275 282 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 PSG6Q00889 435 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 CSTF3Q12996 717 aaKnown RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 RAET1LQ5VY80 246 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 AAGABQ6PD74 315 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF474Q6S9Z5 364 aaPredicted RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 C22orf34Q6ZV56 151 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 CAMKMTQ7Z624 323 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 MARCH3Q86UD3 253 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 FAM9CQ8IZT9 166 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 OR2M3Q8NG83 312 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF845Q96IR2 970 aaPredicted RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 DACH2Q96NX9 599 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 C12orf65Q9H3J6 166 aaKnown RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 PPP4R1LQ9P1A2 415 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 TBK1Q9UHD2 729 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 PACSIN3Q9UKS6 424 aa14.36□□□□□ -0.11
ERGIC3-217ENST00000488935 ZNF337Q9Y3M9 751 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms