RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GPR174Q9BXC1 333 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 HSD3B7Q9H2F3 369 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 SUDS3Q9H7L9 328 aaPredicted RBP2.93□□□□□ -1.94
SSR1-209ENST00000488834 KCNMB3Q9NPA1 279 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 NRN1Q9NPD7 142 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 HPS4Q9NQG7 708 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 AATFQ9NY61 560 aaKnown RBP eCLIP2.93□□□□□ -1.94
SSR1-209ENST00000488834 GON4LQ3T8J9 2241 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 ADAMTS9Q9P2N4 1935 aa2.93□□□□□ -1.94
SSR1-209ENST00000488834 BAZ1BQ9UIG0 1483 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 NPIPA5A0A0B4J1W7 369 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 A0A0J9YVX5 310 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 CLRN2A0PK11 232 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 NPIPA5E9PKD4 350 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 C11orf98E9PRG8 122 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 BOLA2-SMG1P6H3BVE0 249 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 UBXN8O00124 270 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 AP3B1O00203 1094 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 NME2P1O60361 137 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TSC22D2O75157 780 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 PEX11AO75192 247 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 GJB5O95377 273 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 OAS1P00973 400 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 TPM3P06753 285 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 SLC35E2P0CK97 266 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 GHRP10912 638 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 FCARP24071 287 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 FASP25445 335 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TRIM23P36406 574 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 ACAA2P42765 397 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 TNFRSF4P43489 277 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 RGRP47804 291 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 IFNAR2P48551 515 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 SULT1E1P49888 294 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 ARHGDIBP52566 201 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 ATXN3P54252 364 aaPredicted RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 VCPP55072 806 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 SH3BGRP55822 239 aaPredicted RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 CXCL6P80162 114 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 CBX1P83916 185 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 IFT88Q13099 833 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 NME3Q13232 169 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 MSLNQ13421 630 aaPredicted RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 TMED1Q13445 227 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 SERTAD2Q14140 314 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 PDK1Q15118 436 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 QRICH1Q2TAL8 776 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 MS4A13Q5J8X5 152 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 SEL1L2Q5TEA6 688 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 C12orf60Q5U649 245 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 C16orf87Q6PH81 154 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 DLEU7Q6UYE1 221 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 BNIPLQ7Z465 357 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TSEN54Q7Z6J9 526 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 MLKLQ8NB16 471 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 CNNM3Q8NE01 707 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 GMCL1P1Q8NEA9 526 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TMEM185AQ8NFB2 350 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 RFESDQ8TAC1 157 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TFB1MQ8WVM0 346 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 PHYHIPLQ96FC7 376 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 PIWIL1Q96J94 861 aaKnown RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 FAM111AQ96PZ2 611 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 CPXM1Q96SM3 734 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TXN2Q99757 166 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 NT5C3AQ9H0P0 336 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 DPH5Q9H2P9 285 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 VPS37BQ9H9H4 285 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 SYTL2Q9HCH5 934 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 ABCB10Q9NRK6 738 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 CENPMQ9NSP4 180 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 TRIM10Q9UDY6 481 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 Q9UF83 564 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 RPH3AQ9Y2J0 694 aaPredicted RBP2.92□□□□□ -1.94
SSR1-209ENST00000488834 TEX264Q9Y6I9 313 aa2.92□□□□□ -1.94
SSR1-209ENST00000488834 DHX29Q7Z478 1369 aaKnown RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 SLC9B1P1A6NJY1 282 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 A8MX80 341 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 LCMT2O60294 686 aaKnown RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 RANBP6O60518 1105 aaKnown RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 OPN1MWP04001 364 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 ALPPP05187 535 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 OPN1MW2P0DN77 364 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 OPN1MW3P0DN78 364 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 ALPPL2P10696 532 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 PDHBP11177 359 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 GNSP15586 552 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 AHCYP23526 432 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 PAX7P23759 505 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 ACP1P24666 158 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 SAA4P35542 130 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 NUMBP49757 651 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 MEOX2P50222 304 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 RAG2P55895 527 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 GMFBP60983 142 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 NOP14P78316 857 aaKnown RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 CD47Q08722 323 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CCDC173Q0VFZ6 552 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 ZNF79Q15937 498 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CLPPQ16740 277 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms