RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 LOC390937A0A1W2PQ73 354 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAB19A4D1S5 217 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 FITM1A5D6W6 292 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ANXA2P2A6NMY6 339 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM90A27PA6NNH2 459 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 HMSDA8MTL9 139 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 C2orf74A8MZ97 194 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 CDC7O00311 574 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCDO00767 359 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC28A2O43868 658 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR1I1O60431 355 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 GALR3O60755 368 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PEX14O75381 377 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RP2O75695 350 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RGS11O94810 467 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ATG12O94817 140 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 POP4O95707 220 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TSPAN15O95858 294 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MT-CYBP00156 380 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SOD1P00441 154 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TCRBP04435 133 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 S100A9P06702 114 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 THP07101 528 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 GABRA1P14867 456 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PPP3CBP16298 524 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 GPX2P18283 190 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAB3BP20337 219 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SDHBP21912 280 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MAPK3P27361 379 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 CFPP27918 469 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RBMS1P29558 406 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 GABRA5P31644 462 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC6A4P31645 630 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PIK3CGP48736 1102 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ERVPABLB-1P60509 514 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TSPAN5P62079 268 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RPS7P62081 194 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RPL38P63173 70 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EEF1A1P68104 462 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SMAD3P84022 425 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EEF1A2Q05639 463 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RBBP4Q09028 425 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF155Q12901 538 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ECH1Q13011 328 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SNTB1Q13884 538 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SERTAD2Q14140 314 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PTPRRQ15256 657 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RBBP7Q16576 425 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 NTRK2Q16620 822 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ST3GAL2Q16842 350 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SYTL3Q4VX76 610 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 RFTN2Q52LD8 501 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EMC4Q5J8M3 183 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EEF1A1P5Q5VTE0 462 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 LIPKQ5VXJ0 399 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 VASNQ6EMK4 673 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PYHIN1Q6K0P9 492 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC30A6Q6NXT4 461 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MSANTD2Q6P1R3 559 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCIMPQ6UWF3 145 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SUSD1Q6UWL2 747 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TTLL10Q6ZVT0 673 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 BTN2A1Q7KYR7 527 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM17Q86X19 198 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 LRRC28Q86X40 367 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 METTL23Q86XA0 190 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PTOV1Q86YD1 416 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZBTB8OSQ8IWT0 167 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TBC1D19Q8N5T2 526 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 L3MBTL4Q8NA19 623 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM46DQ8NEK8 389 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MDGA1Q8NFP4 955 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR56B4Q8NH76 319 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MOSPD2Q8NHP6 518 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TM9SF4Q92544 642 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ELMOD3Q96FG2 381 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SENP5Q96HI0 755 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR52E6Q96RD3 313 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 DDOQ99489 341 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 SORBS1Q9BX66 1292 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 NLNQ9BYT8 704 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 POLR2J2Q9GZM3 115 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 FZD8Q9H461 694 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF768Q9H5H4 540 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 BARX1Q9HBU1 254 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 EXOSC3Q9NQT5 275 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 THSD1Q9NS62 852 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 CYSLTR2Q9NS75 346 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 PIGVQ9NUD9 493 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM184CQ9NVA4 438 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 MARCH4Q9P2E8 410 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 TNFSF13BQ9Y275 285 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 CA5BQ9Y2D0 317 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 GSTK1Q9Y2Q3 226 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 CHST2Q9Y4C5 530 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 NME7Q9Y5B8 376 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms