RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 FAM71E1Q6IPT2 247 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 AAGABQ6PD74 315 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 TMEM107Q6UX40 140 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 SH2D5Q6ZV89 423 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 TRIM46Q7Z4K8 759 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 TDRPQ86YL5 185 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 TRIM42Q8IWZ5 723 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 OR4K17Q8NGC6 315 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 EPS8L3Q8TE67 593 aaKnown RBP21.45■■□□□ 1.02
PLOD3-215ENST00000487563 SFXN2Q96NB2 322 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 TUBA1CQ9BQE3 449 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 POLDIP3Q9BY77 421 aaKnown RBP21.45■■□□□ 1.02
PLOD3-215ENST00000487563 CRIM1Q9NZV1 1036 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 FBXL2Q9UKC9 423 aa21.45■■□□□ 1.02
PLOD3-215ENST00000487563 WBP11Q9Y2W2 641 aaKnown RBP21.45■■□□□ 1.02
PLOD3-215ENST00000487563 A0A087WV62 115 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 TMIGD3P0DMS9 266 aaPredicted RBP21.44■■□□□ 1.02
PLOD3-215ENST00000487563 KRT4P19013 534 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 TCEA1P23193 301 aaKnown RBP21.44■■□□□ 1.02
PLOD3-215ENST00000487563 AGFG1P52594 562 aaKnown RBP21.44■■□□□ 1.02
PLOD3-215ENST00000487563 TESK1Q15569 626 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 FLYWCH1Q4VC44 716 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 NOXRED1Q6NXP6 359 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 IKBIPQ70UQ0 350 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 C9orf106Q8NAJ2 232 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 OR4N2Q8NGD1 307 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 GPATCH1Q9BRR8 931 aaKnown RBP21.44■■□□□ 1.02
PLOD3-215ENST00000487563 C12orf65Q9H3J6 166 aaKnown RBP21.44■■□□□ 1.02
PLOD3-215ENST00000487563 OXSMQ9NWU1 459 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 PPP4R1LQ9P1A2 415 aa21.44■■□□□ 1.02
PLOD3-215ENST00000487563 ANKHD1Q8IWZ3 2542 aaKnown RBP21.43■■□□□ 1.02
PLOD3-215ENST00000487563 SCO2O43819 266 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 SEC22BO75396 215 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 CTAG2O75638 210 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 ZNHIT3Q15649 155 aaPredicted RBP21.43■■□□□ 1.02
PLOD3-215ENST00000487563 PRSS53Q2L4Q9 553 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 LIPMQ5VYY2 423 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 CLEC6AQ6EIG7 209 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 POMZP3Q6PJE2 187 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 SPNS3Q6ZMD2 512 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 KIF18BQ86Y91 864 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 C4orf33Q8N1A6 199 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 FAM222BQ8WU58 562 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 NRGNQ92686 78 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 TM9SF2Q99805 663 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 IQCGQ9H095 443 aaKnown RBP21.43■■□□□ 1.02
PLOD3-215ENST00000487563 TNFRSF12AQ9NP84 129 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 TAS2R7Q9NYW3 318 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 C19orf53Q9UNZ5 99 aaPredicted RBP21.43■■□□□ 1.02
PLOD3-215ENST00000487563 FIS1Q9Y3D6 152 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 KIAA1549Q9HCM3 1950 aa21.43■■□□□ 1.02
PLOD3-215ENST00000487563 SLC28A1O00337 649 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 RGS14O43566 566 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 IL18BPO95998 194 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 TACR1P25103 407 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 DPP4P27487 766 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 DNAJA1P31689 397 aaKnown RBP21.42■■□□□ 1.02
PLOD3-215ENST00000487563 EVI2BP34910 448 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 ART1P52961 327 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 PSG6Q00889 435 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 DECR1Q16698 335 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.42■■□□□ 1.02
PLOD3-215ENST00000487563 MED12Q93074 2177 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 SPG11Q96JI7 2443 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 AMDHD1Q96NU7 426 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 CLEC4MQ9H2X3 399 aaPredicted RBP21.42■■□□□ 1.02
PLOD3-215ENST00000487563 GLIPR2Q9H4G4 154 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 Q9N2J8 555 aa21.42■■□□□ 1.02
PLOD3-215ENST00000487563 RPH3AQ9Y2J0 694 aaPredicted RBP21.42■■□□□ 1.02
PLOD3-215ENST00000487563 CLCA1A8K7I4 914 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 CD1EP15812 388 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 STARP49675 285 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 GFRA1P56159 465 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 CYP27C1Q4G0S4 372 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 FBXW10Q5XX13 1052 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 METTL2AQ96IZ6 378 aaKnown RBP21.41■■□□□ 1.02
PLOD3-215ENST00000487563 ZFP3Q96NJ6 502 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 LRTM1Q9HBL6 345 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 C1orf109Q9NX04 203 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 MRTO4Q9UKD2 239 aaKnown RBP21.41■■□□□ 1.02
PLOD3-215ENST00000487563 CBLCQ9ULV8 474 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 CELSR1Q9NYQ6 3014 aa21.41■■□□□ 1.02
PLOD3-215ENST00000487563 TUBAL3A6NHL2 446 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 UPK1AO00322 258 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 PLOD2O00469 737 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 CHEK2O96017 543 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 RFX3P48380 749 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 STX5Q13190 355 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 GRAMD2AQ8IUY3 354 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 C10orf107Q8IVU9 208 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 OR2L13Q8N349 312 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 GOT1L1Q8NHS2 421 aaPredicted RBP21.4■■□□□ 1.02
PLOD3-215ENST00000487563 RNF138Q8WVD3 245 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 WNT2BQ93097 391 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 GFM2Q969S9 779 aaKnown RBP21.4■■□□□ 1.02
PLOD3-215ENST00000487563 ELP4Q96EB1 424 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 RMND5BQ96G75 393 aaPredicted RBP21.4■■□□□ 1.02
PLOD3-215ENST00000487563 SFXN3Q9BWM7 321 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 ACBD3Q9H3P7 528 aa21.4■■□□□ 1.02
PLOD3-215ENST00000487563 SDHAF3Q9NRP4 125 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms