RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RASL10BQ96S79 203 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 LRMDAQ9H2I8 198 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 TMEM38AQ9H6F2 299 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 GMPR2Q9P2T1 348 aaKnown RBP16.23■□□□□ 0.19
CHMP3-207ENST00000485465 P2RX2Q9UBL9 471 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 TEKT2Q9UIF3 430 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 PACSIN3Q9UKS6 424 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 PRPF19Q9UMS4 504 aaKnown RBP16.23■□□□□ 0.19
CHMP3-207ENST00000485465 LIPT1Q9Y234 373 aa16.23■□□□□ 0.19
CHMP3-207ENST00000485465 YARS2Q9Y2Z4 477 aaKnown RBP16.23■□□□□ 0.19
CHMP3-207ENST00000485465 PRORSD1PA6NEY8 169 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 FAM220BPB1ANY3 271 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ZNF354AO60765 605 aaPredicted RBP16.22■□□□□ 0.19
CHMP3-207ENST00000485465 DNAJA2O60884 412 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ITGA10O75578 1167 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 DNAJC8O75937 253 aaPredicted RBP16.22■□□□□ 0.19
CHMP3-207ENST00000485465 KCNK2O95069 426 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 AK1P00568 194 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 TFPTP0C1Z6 253 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ARAFP10398 606 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 NR2F1P10589 423 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 SOX11P35716 441 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 GSK3BP49841 420 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 RBBP4Q09028 425 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 FUT5Q11128 374 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 MAPK11Q15759 364 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 SYPL1Q16563 259 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 DECR1Q16698 335 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 MEP1AQ16819 746 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 SPATS1Q496A3 300 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 CRB2Q5IJ48 1285 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 DCST2Q5T1A1 773 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 IFNEQ86WN2 208 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ZZZ3Q8IYH5 903 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 PRR22Q8IZ63 422 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ARHGAP24Q8N264 748 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 BCORP1Q8N888 145 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ANKFN1Q8N957 763 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 SLC38A5Q8WUX1 472 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 TMBIM1Q969X1 311 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 REXO5Q96IC2 774 aaKnown RBP16.22■□□□□ 0.19
CHMP3-207ENST00000485465 LMF1Q96S06 567 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 THTPAQ9BU02 230 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 ALG2Q9H553 416 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 RYDENQ9NUL5 291 aaKnown RBP16.22■□□□□ 0.19
CHMP3-207ENST00000485465 GPR83Q9NYM4 423 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 CD300AQ9UGN4 299 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 USP22Q9UPT9 525 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 NPFFR2Q9Y5X5 522 aa16.22■□□□□ 0.19
CHMP3-207ENST00000485465 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
CHMP3-207ENST00000485465 URB1O60287 2271 aaKnown RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ZFHX4Q86UP3 3567 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 TMEM247A6NEH6 219 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 GSC2O15499 205 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 SLC28A2O43868 658 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 CEACAM4O75871 244 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 IL33O95760 270 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 IGKV1D-16P01601 117 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ABCD3P28288 659 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 SSR4P51571 173 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 CXADRP78310 365 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 PLCXD2Q0VAA5 305 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 RAPSNQ13702 412 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 CEACAM7Q14002 265 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ZNF630Q2M218 657 aaPredicted RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 GPAT3Q53EU6 434 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 CCNJQ5T5M9 372 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ABHD17BQ5VST6 288 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 AGAP7PQ5VUJ5 663 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 FIGNL1Q6PIW4 674 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 LYPD8Q6UX82 237 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ASRGL1Q7L266 308 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 METTL25Q8N6Q8 603 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 RNF148Q8N7C7 305 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 OR2T12Q8NG77 320 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 OMA1Q96E52 524 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 AGAP4Q96P64 663 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 TRNT1Q96Q11 434 aaKnown RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 SDF2Q99470 211 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 CADM1Q9BY67 442 aaKnown RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 STMN3Q9NZ72 180 aa16.21■□□□□ 0.19
CHMP3-207ENST00000485465 MRTO4Q9UKD2 239 aaKnown RBP16.21■□□□□ 0.19
CHMP3-207ENST00000485465 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 TSPAN2O60636 221 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 REM1O75628 298 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 BCHEP06276 602 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 FBXO45P0C2W1 286 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 HSD17B1P14061 328 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 NAGAP17050 411 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 KRT20P35900 424 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 PGM1P36871 562 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 CDK6Q00534 326 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 SCARB2Q14108 478 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 GNA13Q14344 377 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHMP3-207ENST00000485465 VMACQ2NL98 169 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 ERICH5Q6P6B1 374 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 BORAQ6PGQ7 559 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms