RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OR4A16Q8NH70 328 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 GOT1L1Q8NHS2 421 aaPredicted RBP2.22□□□□□ -2.05
SCAF11-207ENST00000484275 NEIL3Q8TAT5 605 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 RNASE8Q8TDE3 154 aaKnown RBP2.22□□□□□ -2.05
SCAF11-207ENST00000484275 RPGRIP1Q96KN7 1286 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 ACCSQ96QU6 501 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 CNPY3Q9BT09 278 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 MAGEF1Q9HAY2 307 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 NRBP1Q9UHY1 535 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 SMIM30A4D0T7 59 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 PDLIM1O00151 329 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 LYPLA1O75608 230 aaPredicted RBP2.21□□□□□ -2.06
SCAF11-207ENST00000484275 SUPT7LO94864 414 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 VCLP18206 1134 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 CTRLP40313 264 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 PAX5Q02548 391 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 SHROOM1Q2M3G4 852 aaPredicted RBP2.21□□□□□ -2.06
SCAF11-207ENST00000484275 TYSND1Q2T9J0 566 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 ZNF789Q5FWF6 425 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 ZNF57Q68EA5 555 aaPredicted RBP2.21□□□□□ -2.06
SCAF11-207ENST00000484275 PRR5LQ6MZQ0 368 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 ZFP2Q6ZN57 461 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 SLC22A16Q86VW1 577 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 OR52J3Q8NH60 311 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 DCUN1D4Q92564 292 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 RDH5Q92781 318 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 P3H4Q92791 437 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 MYDGFQ969H8 173 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 NOL4LQ96MY1 436 aaPredicted RBP2.21□□□□□ -2.06
SCAF11-207ENST00000484275 APOOQ9BUR5 198 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 TERF2IPQ9NYB0 399 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 ONECUT1Q9UBC0 465 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 PARD3Q8TEW0 1356 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 RLFQ13129 1914 aa2.21□□□□□ -2.06
SCAF11-207ENST00000484275 DLGAP1O14490 977 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 ECDO95905 644 aaPredicted RBP2.2□□□□□ -2.06
SCAF11-207ENST00000484275 YWHAHQ04917 246 aaPredicted RBP2.2□□□□□ -2.06
SCAF11-207ENST00000484275 GPAT3Q53EU6 434 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 SULT1C3Q6IMI6 304 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 LINC00696Q6ZRV3 163 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 KCTD9Q7L273 389 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 PYROXD2Q8N2H3 581 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 FIBINQ8TAL6 211 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 RAB39BQ96DA2 213 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 OSBPL8Q9BZF1 889 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 ACOXLQ9NUZ1 547 aa2.2□□□□□ -2.06
SCAF11-207ENST00000484275 BARX2Q9UMQ3 279 aaPredicted RBP2.2□□□□□ -2.06
SCAF11-207ENST00000484275 SLIT3O75094 1523 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 C5orf51A6NDU8 294 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 SDC3O75056 442 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 NUP107P57740 925 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 RPL32P62910 135 aaKnown RBP2.19□□□□□ -2.06
SCAF11-207ENST00000484275 NPRL3Q12980 569 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 MOBPQ13875 183 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 CAMK4Q16566 473 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 CLPPQ16740 277 aaPredicted RBP2.19□□□□□ -2.06
SCAF11-207ENST00000484275 NAT8LQ8N9F0 302 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 TMEM101Q96IK0 257 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 GPR137Q96N19 417 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 NLNQ9BYT8 704 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 MARCH5Q9NX47 278 aa2.19□□□□□ -2.06
SCAF11-207ENST00000484275 TRMT6Q9UJA5 497 aaKnown RBP2.19□□□□□ -2.06
SCAF11-207ENST00000484275 FOXA2Q9Y261 457 aaPredicted RBP2.19□□□□□ -2.06
SCAF11-207ENST00000484275 A0A0J9YVX5 310 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 UROSP10746 265 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 FCARP24071 287 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 NF2P35240 595 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 SNU13P55769 128 aaKnown RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 OTUD4Q01804 1114 aaKnown RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 SCARB2Q14108 478 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 LY6EQ16553 131 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 IFI44LQ53G44 452 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 EOGTQ5NDL2 527 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 MEDAGQ5VYS4 303 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 PRSS42Q7Z5A4 293 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 TSEN54Q7Z6J9 526 aaKnown RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 CSNK1A1LQ8N752 337 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 C7orf33Q8WU49 177 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 PHF10Q8WUB8 498 aaKnown RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 NEIL2Q969S2 332 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 HAVCR1Q96D42 359 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 SPATA17Q96L03 361 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 CHRDL1Q9BU40 450 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 GRPEL1Q9HAV7 217 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 STARD5Q9NSY2 213 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 ZCCHC3Q9NUD5 404 aaKnown RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 ABCB8Q9NUT2 735 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 VPS54Q9P1Q0 977 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
SCAF11-207ENST00000484275 NARFQ9UHQ1 456 aa2.18□□□□□ -2.06
SCAF11-207ENST00000484275 PTPRUQ92729 1446 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 IGKV1D-17A0A075B6S4 117 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 LRRD1A4D1F6 860 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 FAM166BA8MTA8 275 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 SLC28A1O00337 649 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 SDC1P18827 310 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 CD1BP29016 333 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 NUDT1P36639 197 aa2.17□□□□□ -2.06
SCAF11-207ENST00000484275 NME5P56597 212 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms