RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 TSPAN2O60636 221 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 ABCB7O75027 752 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 THBDP07204 575 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 GSTA2P09210 222 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CD8BP10966 210 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 ALDH9A1P49189 494 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CCNG1P51959 295 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 GAS1P54826 345 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 DSCR4P56555 118 aaPredicted RBP11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CORO7P57737 925 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 IFT88Q13099 833 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 EFR3AQ14156 821 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 BEX5Q5H9J7 111 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 MROH9Q5TGP6 573 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 ZNF704Q6ZNC4 412 aaPredicted RBP11.54□□□□□ -0.56
TMEM54-206ENST00000482771 COMMD6Q7Z4G1 85 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CCDC116Q8IYX3 515 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 OR5M1Q8NGP8 315 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 FNDC9Q8TBE3 224 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CNRIP1Q96F85 164 aaPredicted RBP11.54□□□□□ -0.56
TMEM54-206ENST00000482771 SLC35A4Q96G79 324 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 ZNF681Q96N22 645 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 DPH5Q9H2P9 285 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CXorf56Q9H5V9 222 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 SLC12A4Q9UP95 1085 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 ALPK2Q86TB3 2170 aa11.54□□□□□ -0.56
TMEM54-206ENST00000482771 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
TMEM54-206ENST00000482771 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 CCDC188H7C350 402 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 SEC14L5O43304 696 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 BCAS2O75934 225 aaPredicted RBP11.53□□□□□ -0.56
TMEM54-206ENST00000482771 HK1P19367 917 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 IL12BP29460 328 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 KRT20P35900 424 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 CLDN20P56880 219 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 CALCOCO2Q13137 446 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 FGFBP1Q14512 234 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PON3Q15166 354 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 RAET1LQ5VY80 246 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 HEPHL1Q6MZM0 1159 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PTGR2Q8N8N7 351 aaPredicted RBP11.53□□□□□ -0.56
TMEM54-206ENST00000482771 FBF1Q8TES7 1133 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 KAT2AQ92830 837 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 EFHD2Q96C19 240 aaPredicted RBP11.53□□□□□ -0.56
TMEM54-206ENST00000482771 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PHF21BQ96EK2 531 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 GPR78Q96P69 363 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 BTBD9Q96Q07 612 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 NTMT1Q9BV86 223 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 RNF122Q9H9V4 155 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PLSCR4Q9NRQ2 329 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 MED11Q9P086 117 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 PPP4R1LQ9P1A2 415 aa11.53□□□□□ -0.56
TMEM54-206ENST00000482771 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
TMEM54-206ENST00000482771 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 HS3ST1O14792 307 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 SCO2O43819 266 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 KLHL2O95198 593 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 ESRRBO95718 433 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 PAFAH1B1P43034 410 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 PNLIPRP2P54317 469 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 DMTNQ08495 405 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 GALNT1Q10472 559 aaPredicted RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 SGCBQ16585 318 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 METTL2BQ6P1Q9 378 aaKnown RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 KLC3Q6P597 504 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 NPSR1Q6W5P4 371 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 FAM214BQ7L5A3 538 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 CCDC91Q7Z6B0 441 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 WFDC8Q8IUA0 241 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 ZNF611Q8N823 705 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 OR2M3Q8NG83 312 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 OR4N2Q8NGD1 307 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 CAVIN3Q969G5 261 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 PLPPR2Q96GM1 343 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 NSUN5Q96P11 429 aaKnown RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 REG4Q9BYZ8 158 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 ELOVL6Q9H5J4 265 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 FARSBQ9NSD9 589 aaKnown RBP11.52□□□□□ -0.57
TMEM54-206ENST00000482771 WHRNQ9P202 907 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 UTS2RQ9UKP6 389 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 LAMP3Q9UQV4 416 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 ZNF175Q9Y473 711 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 SAR1BQ9Y6B6 198 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 PCNX3Q9H6A9 2034 aa11.52□□□□□ -0.57
TMEM54-206ENST00000482771 A0A096LPK6 155 aa11.51□□□□□ -0.57
TMEM54-206ENST00000482771 HMX2A2RU54 273 aa11.51□□□□□ -0.57
TMEM54-206ENST00000482771 OR2M5A3KFT3 312 aa11.51□□□□□ -0.57
TMEM54-206ENST00000482771 H3BML4 177 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms