RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 RASSF4Q9H2L5 321 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 CXorf21Q9HAI6 301 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 FBXO6Q9NRD1 293 aaPredicted RBP10.43□□□□□ -0.74
USP11-208ENST00000480104 MCTS1Q9ULC4 181 aaKnown RBP10.43□□□□□ -0.74
USP11-208ENST00000480104 CAPN11Q9UMQ6 739 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 SLC22A14Q9Y267 594 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 EFR3BQ9Y2G0 817 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 ATP23Q9Y6H3 246 aa10.43□□□□□ -0.74
USP11-208ENST00000480104 A0A1W2PS29 197 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 CTAGE9A4FU28 777 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 ANKDD1BA6NHY2 528 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 GPR75O95800 540 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 APRTP07741 180 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 CT62P0C5K7 136 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 C1GALT1C1LP0DN25 315 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 HIST1H1TP22492 207 aaPredicted RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 PRTN3P24158 256 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 PTAFRP25105 342 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 RGS4P49798 205 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 SNRPD2P62316 118 aaKnown RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 ZBED6P86452 979 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 NEPROQ6NW34 567 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 LEG1Q6P5S2 330 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 SLCO4C1Q6ZQN7 724 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 SLC46A3Q7Z3Q1 461 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 C1QL2Q7Z5L3 287 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 GALNT10Q86SR1 603 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 SPATA6LQ8N4H0 392 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 MRAPQ8TCY5 172 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 ANKRD7Q92527 254 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 LINGO1Q96FE5 620 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 NAP1L5Q96NT1 182 aaPredicted RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 ITPAQ9BY32 194 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 DDX47Q9H0S4 455 aaKnown RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 ZBTB26Q9HCK0 441 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 MYNNQ9NPC7 610 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 TRMT6Q9UJA5 497 aaKnown RBP10.42□□□□□ -0.74
USP11-208ENST00000480104 MOKQ9UQ07 419 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 AP4B1Q9Y6B7 739 aa10.42□□□□□ -0.74
USP11-208ENST00000480104 DNAJC9-AS1A6NH13 148 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 H2AFYO75367 372 aaKnown RBP10.41□□□□□ -0.74
USP11-208ENST00000480104 SCELO95171 688 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 SYNGR4O95473 234 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 PNPP00491 289 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 PTPN7P35236 360 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 FDFT1P37268 417 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 TNFRSF17Q02223 184 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 AADACL2Q6P093 401 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 LUZP1Q86V48 1076 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 TDRPQ86YL5 185 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 DENND6AQ8IWF6 608 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 TEX29Q8N6K0 151 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 FADS6Q8N9I5 356 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 RBM4BQ9BQ04 359 aaKnown RBP10.41□□□□□ -0.74
USP11-208ENST00000480104 TBCDQ9BTW9 1192 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 KIFC1Q9BW19 673 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 SORBS1Q9BX66 1292 aaKnown RBP10.41□□□□□ -0.74
USP11-208ENST00000480104 IL22Q9GZX6 179 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 DSN1Q9H410 356 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 NTN4Q9HB63 628 aa10.41□□□□□ -0.74
USP11-208ENST00000480104 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP11-208ENST00000480104 A0A1B0GTH6 734 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 GLOD5A6NK44 160 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 ZNF814B7Z6K7 855 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 SHISA8B8ZZ34 492 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 G3V4G9 280 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 CXCL13O43927 109 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.74
USP11-208ENST00000480104 TJP3O95049 919 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 DAOP14920 347 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 ADRA2CP18825 462 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 GALNSP34059 522 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 SSR2P43308 183 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 GAS1P54826 345 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 TIAL1Q01085 375 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP11-208ENST00000480104 MLC1Q15049 377 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 ASTE1Q2TB18 679 aaPredicted RBP10.4□□□□□ -0.74
USP11-208ENST00000480104 TBC1D1Q86TI0 1168 aaPredicted RBP10.4□□□□□ -0.74
USP11-208ENST00000480104 RELL1Q8IUW5 271 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 KRT78Q8N1N4 520 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 CEP112Q8N8E3 955 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 OR2M3Q8NG83 312 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 ABHD3Q8WU67 409 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 LRRC58Q96CX6 371 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 TMCO6Q96DC7 493 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 ADGRG7Q96K78 797 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 COL21A1Q96P44 957 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 RAB6BQ9NRW1 208 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 SLC17A6Q9P2U8 582 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 CORINQ9Y5Q5 1042 aa10.4□□□□□ -0.74
USP11-208ENST00000480104 HERC2O95714 4834 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 M0R1B8 84 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 ACOX3O15254 700 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 SH3BGRLO75368 114 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 TSPAN15O95858 294 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 SLC35E2BP0CK96 405 aa10.39□□□□□ -0.75
USP11-208ENST00000480104 SLC35E2P0CK97 266 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms