RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 VWA5B2Q8N398 1253 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR52E1Q8NGJ3 308 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 CXXC1Q9P0U4 656 aaPredicted RBP23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 NTMQ9P121 344 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 KCNE3Q9Y6H6 103 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF780BQ9Y6R6 833 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 MID1O15344 667 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 AKAP8O43823 692 aaKnown RBP23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 ADH1BP00325 375 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 HLA-DQB1P01920 261 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC1A3P43003 542 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF362Q5T0B9 420 aaPredicted RBP23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 OR52N1Q8NH53 320 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 TP53INP1Q96A56 240 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 CTPS2Q9NRF8 586 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 AP3D1O14617 1153 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 SURF4O15260 269 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 KLF4O43474 513 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 HLA-DPB1P04440 258 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 HMGN1P05114 100 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 C5AR1P21730 350 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 CMPK1P30085 196 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 FABP5Q01469 135 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 UAP1L1Q3KQV9 507 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 HEPHL1Q6MZM0 1159 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 C16orf62Q7Z3J2 963 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 NRROSQ86YC3 692 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 FAM46AQ96IP4 442 aaKnown RBP23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 DEPDC7Q96QD5 511 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 SOSTQ9BQB4 213 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 ASB6Q9NWX5 421 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC17A4Q9Y2C5 497 aa23.07■■□□□ 1.28
SYNGAP1-206ENST00000479510 CENPXA8MT69 81 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 IGHA1P01876 353 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 MC3RP41968 323 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 C18orf63Q68DL7 685 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF425Q6IV72 752 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 VRK2Q86Y07 508 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 SAMD14Q8IZD0 417 aaPredicted RBP23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 PSD4Q8NDX1 1056 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 OR52P1PQ8NH57 321 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 TRPV4Q9HBA0 871 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 POLHQ9Y253 713 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 GPR52Q9Y2T5 361 aa23.06■■□□□ 1.28
SYNGAP1-206ENST00000479510 CERS1P27544 350 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 ERVK-21P61565 698 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF750Q32MQ0 723 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 LCN1P1Q5VSP4 162 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 MBOAT2Q6ZWT7 520 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 KLHL36Q8N4N3 616 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 ARIH2OSQ8N7S6 290 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 QRSL1Q9H0R6 528 aaKnown RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 KRCC1Q9NPI7 259 aaPredicted RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 NLGN3Q9NZ94 848 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 CNIH4Q9P003 139 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 GPR55Q9Y2T6 319 aaPredicted RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 YARS2Q9Y2Z4 477 aaKnown RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 HEBP2Q9Y5Z4 205 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 CPSF4LA6NMK7 179 aaKnown RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 ALPPL2P10696 532 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 HTR1FP30939 366 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 RIN1Q13671 783 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 PGGHGQ32M88 737 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 FAM214AQ32MH5 1076 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 PYDC2Q56P42 97 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 HMGN2P46Q86SG4 172 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 GIMAP5Q96F15 307 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 TM9SF2Q99805 663 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 C11orf54Q9H0W9 315 aaPredicted RBP23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 CLCA2Q9UQC9 943 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 KCNK6Q9Y257 313 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 CHST2Q9Y4C5 530 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 NUMA1Q14980 2115 aa23.05■■□□□ 1.28
SYNGAP1-206ENST00000479510 TRPM6Q9BX84 2022 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 CEACAM5P06731 702 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 RGS8P57771 180 aaPredicted RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 ENPP2Q13822 863 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 TAB1Q15750 504 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 TYW3Q6IPR3 259 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 PLEKHM3Q6ZWE6 761 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC7A5P1Q8MH63 180 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 OR9A2Q8NGT5 310 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 PHOSPHO2Q8TCD6 241 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZC3HAV1LQ96H79 300 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 KIR3DX1Q9H7L2 352 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 MTHFD2LQ9H903 347 aaPredicted RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 CACYBPQ9HB71 228 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 DDX28Q9NUL7 540 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 TOR4AQ9NXH8 423 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 PCDHGB7Q9Y5F8 929 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 CDH10Q9Y6N8 788 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 LINC01553A4QN01 128 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 GNSP15586 552 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 MLLT3P42568 568 aaPredicted RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 BDH1Q02338 343 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 LRRC32Q14392 662 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF620Q6ZNG0 422 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 OR4Q3Q8NH05 313 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 ADAMTS15Q8TE58 950 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms