RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CTBP2P56545 445 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 DR1Q01658 176 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 GTF2H2Q13888 395 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 ADAM5Q6NVV9 412 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 GTF2H2CQ6P1K8 395 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 STAC2Q6ZMT1 411 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 LARP4Q71RC2 724 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX56-210ENST00000479440 GOLGA7Q7Z5G4 137 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 FADS6Q8N9I5 356 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 RNF138Q8WVD3 245 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 SLCO5A1Q9H2Y9 848 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 IPPKQ9H8X2 491 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 BARX1Q9HBU1 254 aaPredicted RBP14.45□□□□□ -0.1
DDX56-210ENST00000479440 PPP2R2CQ9Y2T4 447 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 GPR55Q9Y2T6 319 aaPredicted RBP14.45□□□□□ -0.1
DDX56-210ENST00000479440 RNF115Q9Y4L5 304 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 ZNF780BQ9Y6R6 833 aa14.45□□□□□ -0.1
DDX56-210ENST00000479440 CCDC189A1A4V9 331 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 H0YC42 278 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 TSPAN2O60636 221 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 CLDN9O95484 217 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 MTHFD2P13995 350 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 PCSK2P16519 638 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 CRABP2P29373 138 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 EVI2BP34910 448 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ACVR1BP36896 505 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 SUCLG1P53597 346 aaKnown RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 PNLIPRP2P54317 469 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 GAS1P54826 345 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ALDH18A1P54886 795 aaKnown RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 TPD52P55327 224 aaPredicted RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 CLDN15P56746 228 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 DLG1Q12959 904 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 LTB4RQ15722 352 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 SGCBQ16585 318 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 PFKFB4Q16877 469 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ERCC6LQ2NKX8 1250 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 TRMT12Q53H54 448 aaKnown RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 PPP4R4Q6NUP7 873 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 BEND4Q6ZU67 534 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 STK32CQ86UX6 486 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 RHEBL1Q8TAI7 183 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 PYROXD1Q8WU10 500 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ERP27Q96DN0 273 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 GMPPAQ96IJ6 420 aaPredicted RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 HS6ST2Q96MM7 605 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 FAIM2Q9BWQ8 316 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 MRPL1Q9BYD6 325 aaKnown RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 PRRG4Q9BZD6 226 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 DSN1Q9H410 356 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 PTGES2Q9H7Z7 377 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ZBTB26Q9HCK0 441 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 SDHAF3Q9NRP4 125 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 PLSCR4Q9NRQ2 329 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 CES1P1Q9UKY3 287 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 SNX12Q9UMY4 172 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 ACOT9Q9Y305 439 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 RNF11Q9Y3C5 154 aa14.44□□□□□ -0.1
DDX56-210ENST00000479440 TNPO3Q9Y5L0 923 aaKnown RBP14.44□□□□□ -0.1
DDX56-210ENST00000479440 OR2M5A3KFT3 312 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 B4DXG7 233 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 SCO2O43819 266 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 SS18L1O75177 396 aaPredicted RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 CDKN1AP38936 164 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 CLDN20P56880 219 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 MRPS35P82673 323 aaKnown RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 C6orf52Q5T4I8 152 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 GRTP1Q5TC63 336 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 TTC19Q6DKK2 380 aaPredicted RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 METTL2BQ6P1Q9 378 aaKnown RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 CMC1Q7Z7K0 106 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 OR2M3Q8NG83 312 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 ZNF675Q8TD23 568 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 TRPC4APQ8TEL6 797 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 TRIM31Q9BZY9 425 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 LRTM1Q9HBL6 345 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 SAYSD1Q9NPB0 183 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 PFDN4Q9NQP4 134 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 STOML1Q9UBI4 398 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 GPR52Q9Y2T5 361 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 ZNF337Q9Y3M9 751 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 MAGED1Q9Y5V3 778 aaPredicted RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 SNX8Q9Y5X2 465 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 AP4B1Q9Y6B7 739 aa14.43□□□□□ -0.1
DDX56-210ENST00000479440 SONP18583 2426 aaKnown RBP14.43□□□□□ -0.1
DDX56-210ENST00000479440 A0A1W2PP18 115 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 TCRBV9S1A1TA0A576 114 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CLOCKO15516 846 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 ADAM11O75078 769 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 AQP8O94778 261 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 FESP07332 822 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 SOD3P08294 240 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CT45A8P0DMV1 189 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CT45A9P0DMV2 189 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 PSMB1P20618 241 aaKnown RBP14.42□□□□□ -0.1
DDX56-210ENST00000479440 SSTR1P30872 391 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CORO7P57737 925 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 IFT88Q13099 833 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CT45A2Q5DJT8 189 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 FRG2Q64ET8 278 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms