RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ELMO2Q96JJ3 720 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 PSKH2Q96QS6 385 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 CCT7Q99832 543 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 OMDQ99983 421 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 HSD17B14Q9BPX1 270 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 RPP25Q9BUL9 199 aaKnown RBP4.24□□□□□ -1.73
UPF3B-203ENST00000478840 COMMD4Q9H0A8 199 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 SLC25A51Q9H1U9 297 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 RBM28Q9NW13 759 aaKnown RBP4.24□□□□□ -1.73
UPF3B-203ENST00000478840 RNF14Q9UBS8 474 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 ZNF580Q9UK33 172 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 GSTK1Q9Y2Q3 226 aa4.24□□□□□ -1.73
UPF3B-203ENST00000478840 ZSCAN5CA6NGD5 496 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 UBXN8O00124 270 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 EDIL3O43854 480 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 RAMP1O60894 148 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 SNNO75324 88 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 TM7SF2O76062 418 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 CAPN1P07384 714 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 FCGR3AP08637 254 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 H2AFXP16104 143 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 HNF1AP20823 631 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PBLDP30039 288 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 DHPSP49366 369 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 KRTAP10-11P60412 298 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PJVKQ0ZLH3 352 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 RABL6Q3YEC7 729 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PRR5LQ6MZQ0 368 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PNCKQ6P2M8 343 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 BLOC1S2Q6QNY1 142 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 BTNL3Q6UXE8 466 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 ADAMTSL5Q6ZMM2 481 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 TSEN54Q7Z6J9 526 aaKnown RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 RPAINQ86UA6 219 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PHC2Q8IXK0 858 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 ZNF683Q8IZ20 524 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 AQP11Q8NBQ7 271 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 HCAR2Q8TDS4 363 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 DHTKD1Q96HY7 919 aaPredicted RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 SECISBP2Q96T21 854 aaKnown RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 FGFBP2Q9BYJ0 223 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PUS3Q9BZE2 481 aaKnown RBP4.23□□□□□ -1.73
UPF3B-203ENST00000478840 IL1RL2Q9HB29 575 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 RAI14Q9P0K7 980 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 MLXQ9UH92 298 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 PROCRQ9UNN8 238 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 SMC3Q9UQE7 1217 aa4.23□□□□□ -1.73
UPF3B-203ENST00000478840 GRIN2DO15399 1336 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TRGV8A0A0C4DH27 118 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 MFSD2BA6NFX1 497 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TYROBPO43914 113 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 SURF6O75683 361 aaKnown RBP4.22□□□□□ -1.73
UPF3B-203ENST00000478840 ANXA3P12429 323 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TPSB2P20231 275 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 EMDP50402 254 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 PRELPP51888 382 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 SLC7A2P52569 658 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 EIF2B1Q14232 305 aaKnown RBP4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TPSAB1Q15661 275 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 CAMK4Q16566 473 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 FAM182AQ5T1J6 154 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 DPY19L4Q7Z388 723 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 ZNF491Q8N8L2 437 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 ANKFN1Q8N957 763 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 BEST4Q8NFU0 473 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 OR52J3Q8NH60 311 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 FLVCR1-AS1Q8TAF5 88 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TRMT10AQ8TBZ6 339 aaKnown RBP4.22□□□□□ -1.73
UPF3B-203ENST00000478840 FNDC8Q8TC99 324 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 MYLPFQ96A32 169 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 PRICKLE1Q96MT3 831 aaPredicted RBP4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TTYH2Q9BSA4 534 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TCHPQ9BT92 498 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 EDEM2Q9BV94 578 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 VCX2Q9H322 139 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 LIME1Q9H400 295 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 APMAPQ9HDC9 416 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 ZNF446Q9NWS9 450 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 TAS2R16Q9NYV7 291 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 THEGQ9P2T0 379 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 ASIC3Q9UHC3 531 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 CYTH4Q9UIA0 394 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 FBXO7Q9Y3I1 522 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 SLCO1B1Q9Y6L6 691 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 SPACA6W5XKT8 324 aa4.22□□□□□ -1.73
UPF3B-203ENST00000478840 SALL1Q9NSC2 1324 aa4.21□□□□□ -1.73
UPF3B-203ENST00000478840 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 A0A1W2PNV4 684 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 KRTAP29-1A8MX34 341 aaPredicted RBP4.21□□□□□ -1.74
UPF3B-203ENST00000478840 B3GAT3O94766 335 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 SORBS2O94875 1100 aaKnown RBP4.21□□□□□ -1.74
UPF3B-203ENST00000478840 DUS4LO95620 317 aaKnown RBP4.21□□□□□ -1.74
UPF3B-203ENST00000478840 NUDT14O95848 222 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 HCKP08631 526 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 BCKDHAP12694 445 aa4.21□□□□□ -1.74
UPF3B-203ENST00000478840 TBXA2RP21731 343 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms