RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CCR6P51684 374 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ROR1Q01973 937 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ZNF57Q68EA5 555 aaPredicted RBP1.3□□□□□ -2.2
HPS3-205ENST00000478525 RTL6Q6ICC9 239 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 OR5M10Q6IEU7 315 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 OR52W1Q6IF63 320 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 PRR5LQ6MZQ0 368 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 SLC30A6Q6NXT4 461 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ASRGL1Q7L266 308 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 TSEN54Q7Z6J9 526 aaKnown RBP1.3□□□□□ -2.2
HPS3-205ENST00000478525 CSNK1A1LQ8N752 337 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 Q8NFD4 153 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 OR52J3Q8NH60 311 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ARNTL2Q8WYA1 636 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ABCG8Q9H221 673 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 SRD5A3Q9H8P0 318 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 TRPC4Q9UBN4 977 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 EXOC7Q9UPT5 735 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 SYNJ2O15056 1496 aa1.3□□□□□ -2.2
HPS3-205ENST00000478525 ARHGEF37A1IGU5 675 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 NKX2-6A6NCS4 301 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 ZNF233A6NK53 670 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 ATP9AO75110 1047 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 SIX3O95343 332 aaPredicted RBP1.29□□□□□ -2.2
HPS3-205ENST00000478525 RETP07949 1114 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 CELP19835 753 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 MAT2AP31153 395 aaKnown RBP1.29□□□□□ -2.2
HPS3-205ENST00000478525 UBXN1Q04323 297 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 NFE2L1Q14494 772 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 SHROOM1Q2M3G4 852 aaPredicted RBP1.29□□□□□ -2.2
HPS3-205ENST00000478525 CFAP161Q6P656 301 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 KRT74Q7RTS7 529 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 ASPGQ86U10 573 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 NTMT1Q9BV86 223 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 NARFLQ9H6Q4 476 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 PFDN4Q9NQP4 134 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 MARCOQ9UEW3 520 aaPredicted RBP1.29□□□□□ -2.2
HPS3-205ENST00000478525 SMC3Q9UQE7 1217 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 KCNK6Q9Y257 313 aa1.29□□□□□ -2.2
HPS3-205ENST00000478525 TUBAL3A6NHL2 446 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 PDLIM1O00151 329 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 AIREO43918 545 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 IGHV3-48P01763 117 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 CHRNGP07510 517 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 NSFP46459 744 aaKnown RBP1.28□□□□□ -2.2
HPS3-205ENST00000478525 KCNJ1P48048 391 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 ZNF41P51814 821 aaPredicted RBP1.28□□□□□ -2.2
HPS3-205ENST00000478525 FUT7Q11130 342 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 SYPL1Q16563 259 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 MFSD4BQ5TF39 518 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 CDC42EP5Q6NZY7 148 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 BRD3OSQ6XYD6 125 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 OR4F17Q8NGA8 305 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 OR2AP1Q8NGE2 309 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 OR2L8Q8NGY9 312 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 GLYATL1Q969I3 302 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 MRPL53Q96EL3 112 aaKnown RBP1.28□□□□□ -2.2
HPS3-205ENST00000478525 RNF185Q96GF1 192 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 OR4F4Q96R69 305 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 ELOVL2Q9NXB9 296 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 ANAPC5Q9UJX4 755 aa1.28□□□□□ -2.2
HPS3-205ENST00000478525 SCN2AQ99250 2005 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 ANKRD30BQ9BXX2 1392 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 IGLV2-18A0A075B6J9 118 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 IGHV7-81A0A0B4J1V7 117 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 TRBV7-9A0A0J9YWB2 115 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 FAM149AA5PLN7 773 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 SLC30A4O14863 429 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 NME6O75414 186 aaPredicted RBP1.27□□□□□ -2.21
HPS3-205ENST00000478525 REC8O95072 547 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 CSNK1DP48730 415 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 ACTA1P68133 377 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 MAP2K1Q02750 393 aaPredicted RBP1.27□□□□□ -2.21
HPS3-205ENST00000478525 LRRC36Q1X8D7 754 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 CMPK2Q5EBM0 449 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 C1orf141Q5JVX7 400 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 LRRC38Q5VT99 294 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 TRAT1Q6PIZ9 186 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 RNF165Q6ZSG1 346 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 HMGN2P46Q86SG4 172 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 MYOCDQ8IZQ8 938 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 PSMG2Q969U7 264 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 CDKN2AIPNLQ96HQ2 116 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 TXN2Q99757 166 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 FUNDC2Q9BWH2 189 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 FUT8Q9BYC5 575 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 OPN4Q9UHM6 478 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 ERVW-1Q9UQF0 538 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 CLCA3PQ9Y6N3 262 aa1.27□□□□□ -2.21
HPS3-205ENST00000478525 THSD7BQ9C0I4 1608 aa1.26□□□□□ -2.21
HPS3-205ENST00000478525 GPR179Q6PRD1 2367 aa1.26□□□□□ -2.21
HPS3-205ENST00000478525 ARID4BQ4LE39 1312 aaPredicted RBP1.26□□□□□ -2.21
HPS3-205ENST00000478525 IGHV3-64DA0A0J9YX35 117 aa1.26□□□□□ -2.21
HPS3-205ENST00000478525 COLCA2A8K830 154 aa1.26□□□□□ -2.21
HPS3-205ENST00000478525 EIF5BO60841 1220 aaKnown RBP1.26□□□□□ -2.21
HPS3-205ENST00000478525 GLCEO94923 617 aa1.26□□□□□ -2.21
HPS3-205ENST00000478525 ECDO95905 644 aaPredicted RBP1.26□□□□□ -2.21
HPS3-205ENST00000478525 DCNP07585 359 aaKnown RBP1.26□□□□□ -2.21
HPS3-205ENST00000478525 OR8U8P0C7N1 319 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms