RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 Q9N2J8 555 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 ATAD3AQ9NVI7 634 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 KLRF1Q9NZS2 232 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 TNFRSF10DQ9UBN6 386 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 SUCOQ9UBS9 1254 aaKnown RBP14.26□□□□□ -0.13
HMGA1-206ENST00000478214 B4GALT7Q9UBV7 327 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 CBLCQ9ULV8 474 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 HRH3Q9Y5N1 445 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 TRGV5A0A0B4J1U4 118 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 A0A1B0GVC2 190 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GXYLT2A0PJZ3 443 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 ADAM10O14672 748 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 SASH3O75995 380 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 CLDN1O95832 211 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 C6orf47O95873 294 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 ESRRAP11474 423 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 CYP4B1P13584 511 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GDF1P27539 372 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 EPHA3P29320 983 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GABRA3P34903 492 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 TRPC1P48995 793 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 PNLIPRP2P54317 469 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 SNTA1Q13424 505 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 EFR3AQ14156 821 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 PGS1Q32NB8 556 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 CYP27C1Q4G0S4 372 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 EMC4Q5J8M3 183 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 TIGD3Q6B0B8 471 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 LRRC34Q8IZ02 419 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 CEP70Q8NHQ1 597 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 FBXO30Q8TB52 745 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 PIK3R3Q92569 461 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 HOXB13Q92826 284 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 FAM120BQ96EK7 910 aaKnown RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GIMAP5Q96F15 307 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 C16orf58Q96GQ5 468 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 DUSP26Q9BV47 211 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 BHLHE41Q9C0J9 482 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 SLC6A15Q9H2J7 730 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 WDR55Q9H6Y2 383 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 EXO5Q9H790 373 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 CXorf36Q9H7Y0 433 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 C3orf14Q9HBI5 128 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 ACKR4Q9NPB9 350 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 QPCTLQ9NXS2 382 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 PLEKHB1Q9UF11 243 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-206ENST00000478214 C15orf41Q9Y2V0 281 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 MEMO1Q9Y316 297 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 NBPF19A0A087WUL8 3843 aa14.25□□□□□ -0.13
HMGA1-206ENST00000478214 GTF3C1Q12789 2109 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 GOLGA8QA0A0J9YX86 632 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 GOLGA8OA6NCC3 632 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 TTC36A6NLP5 189 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 GOLGA8NF8WBI6 632 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 AQP7O14520 342 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 KLF11O14901 512 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 SNPHO15079 494 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ANKRD28O15084 1053 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 SUSD5O60279 629 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 HCN1O60741 890 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 TRAPPC6AO75865 159 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ALDOCP09972 364 aaKnown RBP14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ACP2P11117 423 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 GP1BBP13224 206 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ENDOUP21128 410 aaKnown RBP14.24□□□□□ -0.13
HMGA1-206ENST00000478214 MAP3K8P41279 467 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 RFX3P48380 749 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ADORA2A-AS1P86434 159 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 DECR1Q16698 335 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 HIST2H2BCQ6DN03 193 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 OR4F3Q6IEY1 312 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 OGFOD2Q6N063 350 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 MFSD12Q6NUT3 480 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 MTFR2Q6P444 385 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 CAMKMTQ7Z624 323 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 NATD1Q8N6N6 113 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 OR5M9Q8NGP3 310 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 OR1J4Q8NGS1 313 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 GPR151Q8TDV0 419 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 RNF138Q8WVD3 245 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 SLC9A6Q92581 669 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 MS4A4EQ96PG1 132 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 DPY30Q9C005 99 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 UBQLN3Q9H347 655 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
HMGA1-206ENST00000478214 SPRR3Q9UBC9 169 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 MAPRE3Q9UPY8 281 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 SNX8Q9Y5X2 465 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 DNAJC13O75165 2243 aa14.24□□□□□ -0.13
HMGA1-206ENST00000478214 OR14I1A6ND48 311 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 TRPC5OSA6NMA1 111 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 HMGB1P1B2RPK0 211 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 E9PLN8 166 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 SLCO1B7G3V0H7 640 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 NKX2-2O95096 273 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 IL33O95760 270 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms