RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ATG12	O94817	140 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARIH2	O95376	493 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	VNN2	O95498	520 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MPC2	O95563	127 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	IL18BP	O95998	194 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MT-CYB	P00156	380 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SERPINA3	P01011	423 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CSF2	P04141	144 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FCER2	P06734	321 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MMP3	P08254	477 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ADH4	P08319	380 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACAA1	P09110	424 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBB	P0CG47	229 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBC	P0CG48	685 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CKB	P12277	381 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CPE	P16870	476 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CR2	P20023	1033 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPIB	P23284	216 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	AKAP5	P24588	427 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	LMO1	P25800	156 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACRV1	P26436	265 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	YWHAQ	P27348	245 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	HTR2A	P28223	471 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CST5	P28325	142 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CCND3	P30281	292 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ATP5C1	P36542	298 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CASP2	P42575	452 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CRYBB2	P43320	205 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CCR10	P46092	362 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RFX3	P48380	749 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MAN2A2	P49641	1150 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CSNK1E	P49674	416 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RAB5C	P51148	216 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	STAT5B	P51692	787 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARPP19	P56211	112 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	AP3S2	P59780	193 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RAC3	P60763	192 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNRPG	P62308	76 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPS27A	P62979	156 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBA52	P62987	128 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	EIF5A	P63241	154 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SHC2	P98077	582 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MC2R	Q01718	297 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SP2	Q02086	613 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACY1	Q03154	408 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAP2	Q03519	686 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	COL10A1	Q03692	680 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	YWHAH	Q04917	246 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FPGS	Q05932	587 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARHGAP1	Q07960	439 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	DSC1	Q08554	894 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FOXO1	Q12778	655 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	BIK	Q13323	160 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNTB1	Q13884	538 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	COTL1	Q14019	142 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	VEZF1	Q14119	521 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SIM2	Q14190	667 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GRM7	Q14831	915 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBXN2B	Q14CS0	331 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FCN2	Q15485	313 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MED22	Q15528	200 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TESK1	Q15569	626 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SF1	Q15637	639 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR68	Q15743	365 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TST	Q16762	297 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM44	Q2T9K0	475 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SV2C	Q496J9	727 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLK5	Q496M5	336 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	KLHL26	Q53HC5	615 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UNC50	Q53HI1	259 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	XKR7	Q5GH72	579 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAGE3	Q5JUK9	113 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C10orf91	Q5T1B1	145 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	HECTD3	Q5T447	861 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM171A1	Q5VUB5	890 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ANKS6	Q68DC2	871 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF57	Q68EA5	555 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	KIAA1161	Q6NSJ0	714 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SWSAP1	Q6NVH7	229 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ABHD15	Q6UXT9	468 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520		Q6ZPA2	131 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CHMP1B	Q7LBR1	199 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLPPR4	Q7Z2D5	763 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MRGPRG	Q86SM5	289 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SERPINA11	Q86U17	422 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	OAF	Q86UD1	273 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	LRRC28	Q86X40	367 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CALHM3	Q86XJ0	350 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	LAX1	Q8IWV1	398 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR6V1	Q8N148	313 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	THEM5	Q8N1Q8	247 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC44A3	Q8N4M1	653 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C15orf54	Q8N8G6	183 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	DCBLD1	Q8N8Z6	715 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM145	Q8NBT3	493 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM46D	Q8NEK8	389 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPHLN1	Q8NEY8	458 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PXT1	Q8NFP0	134 aa		4.43	□□□□□ -1.7

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