RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CAPN13Q6MZZ7 669 aaPredicted RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRD54Q6NXT1 300 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 H3F3CQ6NXT2 135 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 FAM122CQ6P4D5 195 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM71Q6P5X7 295 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 VWA1Q6PCB0 445 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 KCTD18Q6PI47 426 aaPredicted RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 KCNIP4Q6PIL6 250 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TRIM65Q6PJ69 517 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC137Q6PK04 289 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM220Q6QAJ8 160 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RBM44Q6ZP01 1051 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC55Q6ZSA7 311 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 NDUFAF7Q7L592 441 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 H2BFWTQ7Z2G1 175 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 BCDIN3DQ7Z5W3 292 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 PATL1Q86TB9 770 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMPRSS12Q86WS5 348 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC6Q86X45 466 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 CHSY1Q86X52 802 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 STX12Q86Y82 276 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ZDHHC13Q8IUH4 622 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 KBTBD2Q8IY47 623 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 BEST3Q8N1M1 668 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 PCDH20Q8N6Y1 951 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 BMPERQ8N8U9 685 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 MLKLQ8NB16 471 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ICA1LQ8NDH6 482 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM104Q8NE00 496 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RDM1Q8NG50 284 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 OR5T1Q8NG75 326 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF461Q8TAF7 563 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RHEBL1Q8TAI7 183 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 THAP6Q8TBB0 222 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SCARB1Q8WTV0 552 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ASB5Q8WWX0 329 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ARNTL2Q8WYA1 636 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ST8SIA1Q92185 356 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SUSD6Q92537 303 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 LPAR1Q92633 364 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SEMA4DQ92854 862 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 MAP4K1Q92918 833 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TOP1MTQ969P6 601 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ZG16BQ96DA0 208 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SLC47A1Q96FL8 570 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 CERS2Q96G23 380 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 KIRREL1Q96J84 757 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 GLT1D1Q96MS3 346 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TESK2Q96S53 571 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 COPS8Q99627 209 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 CMKLR1Q99788 373 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TUBGCP2Q9BSJ2 902 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TRIM9Q9C026 710 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 CIPCQ9C0C6 399 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 MFFQ9GZY8 342 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 MIS12Q9H081 205 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RAB1BQ9H0U4 201 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 R3HDMLQ9H3Y0 253 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RIMS4Q9H426 269 aaPredicted RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RNF121Q9H920 327 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 VIPAS39Q9H9C1 493 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM165Q9HC07 324 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 Q9N2K0 584 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RAB9BQ9NP90 201 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 NT5MQ9NPB1 228 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SPAG4Q9NPE6 437 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 DYRK4Q9NR20 520 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 GKN1Q9NS71 199 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ECHDC1Q9NTX5 307 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SERTAD4Q9NUC0 356 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 POT1Q9NUX5 634 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 LYARQ9NX58 379 aaKnown RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 SLC39A1Q9NY26 324 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ADAM22Q9P0K1 906 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 PSMC3IPQ9P2W1 217 aaPredicted RBP2.65□□□□□ -1.99
HMGN4-202ENST00000477243 B3GAT1Q9P2W7 334 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 FBXL2Q9UKC9 423 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 VANGL2Q9ULK5 521 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ADAMTS5Q9UNA0 930 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 WDR83OSQ9Y284 106 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 GSTK1Q9Y2Q3 226 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 TMED7Q9Y3B3 224 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RHBDD3Q9Y3P4 386 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 ZHX2Q9Y6X8 837 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 UMODL1Q5DID0 1318 aa2.65□□□□□ -1.99
HMGN4-202ENST00000477243 RGPD8O14715 1765 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 DSPP15924 2871 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 POLR3AO14802 1390 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRD36BQ8N2N9 1353 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC7Q96M83 1385 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NHSQ6T4R5 1651 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ALS2Q96Q42 1657 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 C1orf232A0A0U1RR37 186 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GOLGA6L9A6NEM1 432 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC182A6NF36 153 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 FRG2CA6NGY1 282 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 YJEFN3A6XGL0 299 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 WASHC1A8K0Z3 465 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 H0YHG0 523 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 HAS3O00219 553 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms