RNA–Protein interactions for RNA: ENST00000475480.5

TMEM41A-206, Transcript of transmembrane protein 41A, human

TSL 3

Gene TMEM41A, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM41A-206	ENST00000475480	ATP6V1G3	Q96LB4	118 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	BTBD9	Q96Q07	612 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PAFAH2	Q99487	392 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	REXO4	Q9GZR2	422 aa	Known RBP	12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	IL22	Q9GZX6	179 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	INTS10	Q9NVR2	710 aa	Known RBP	12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ARL15	Q9NXU5	204 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FBXL2	Q9UKC9	423 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	CLEC4A	Q9UMR7	237 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	DYRK1B	Q9Y463	629 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ZNF175	Q9Y473	711 aa		12.11	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ZIC3	O60481	467 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ALDOA	P04075	364 aa	Known RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PEPD	P12955	493 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ZNF23	P17027	643 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	HIST1H2AD	P20671	130 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	IL11	P20809	199 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ABCD3	P28288	659 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	NEK2	P51955	445 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ARFIP2	P53365	341 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	HILS1	P60008	231 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SARNP	P82979	210 aa	Known RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PLIN5	Q00G26	463 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SP140	Q13342	867 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FBLN7	Q53RD9	439 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ARMC3	Q5W041	872 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ADNP2	Q6IQ32	1131 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FIGNL1	Q6PIW4	674 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	RINL	Q6ZS11	566 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	VN1R5	Q7Z5H4	357 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	MTERF4	Q7Z6M4	381 aa	Known RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ZNF418	Q8TF45	676 aa	Predicted RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ADIPOR1	Q96A54	375 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ZNF669	Q96BR6	464 aa	Predicted RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	HIST1H2AH	Q96KK5	128 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	HIST1H2AJ	Q99878	128 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	H2AFJ	Q9BTM1	129 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FANCF	Q9NPI8	374 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	EMC9	Q9Y3B6	208 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	MAD1L1	Q9Y6D9	718 aa		12.1	□□□□□ -0.47
TMEM41A-206	ENST00000475480	EXOC1L	A0A1B0GW35	172 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SMIM23	A6NLE4	172 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480		B4DXG7	233 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	LINC01387	J3KSC0	135 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	AIFM1	O95831	613 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ALOX15	P16050	662 aa	Predicted RBP	12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SSTR4	P31391	388 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	STX2	P32856	288 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PDLIM4	P50479	330 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	NRG3	P56975	720 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SPANXN3	Q5MJ09	141 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	THOC6	Q86W42	341 aa	Known RBP	12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PLCZ1	Q86YW0	608 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	CNTN4	Q8IWV2	1026 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PALM2	Q8IXS6	379 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	C7orf57	Q8NEG2	295 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	MRPL24	Q96A35	216 aa	Known RBP	12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	FBXL8	Q96CD0	374 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	CERS2	Q96G23	380 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	F2RL3	Q96RI0	385 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PKP2	Q99959	881 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PIMREG	Q9BSJ6	248 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	NAT9	Q9BTE0	207 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	KRTAP17-1	Q9BYP8	105 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	CCDC68	Q9H2F9	335 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	KLRF1	Q9NZS2	232 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	BFAR	Q9NZS9	450 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	PCDHB10	Q9UN67	800 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480	SNX8	Q9Y5X2	465 aa		12.09	□□□□□ -0.47
TMEM41A-206	ENST00000475480		E7EQL1	145 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	NDUFS8	O00217	210 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	SMAD9	O15198	467 aa	Known RBP	12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	SEC14L5	O43304	696 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	CLEC3A	O75596	197 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	GCM2	O75603	506 aa	Predicted RBP	12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	PPM1B	O75688	479 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	ARAF	P10398	606 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	CPN2	P22792	545 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	CNTF	P26441	200 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	GABRB3	P28472	473 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	GYS2	P54840	703 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	CLDN20	P56880	219 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	EEFSEC	P57772	596 aa	Known RBP	12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	SNTA1	Q13424	505 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	MPP2	Q14168	576 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	HLA-DQA1	Q5Y7H0	255 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	NEPRO	Q6NW34	567 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	TMIGD1	Q6UXZ0	262 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	UBE3D	Q7Z6J8	389 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	TRABD2A	Q86V40	505 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	EXOC3L1	Q86VI1	746 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	DENND6A	Q8IWF6	608 aa		12.08	□□□□□ -0.48
TMEM41A-206	ENST00000475480	RIBC1	Q8N443	379 aa	Predicted RBP	12.08	□□□□□ -0.48

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