RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RNF224P0DH78 156 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PPIAL4GP0DN37 164 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 FOSL2P15408 326 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 SPRP35270 261 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ACTR1AP61163 376 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 FKBP3Q00688 224 aaKnown RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 GPM6BQ13491 265 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 MESDQ14696 234 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 RFTN1Q14699 578 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 UNC50Q53HI1 259 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 CYBRD1Q53TN4 286 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 SCYL2Q6P3W7 929 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF562Q6V9R5 426 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 Q6ZRP5 223 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 STOX1Q6ZVD7 989 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 NUFIP2Q7Z417 695 aaKnown RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 CUZD1Q86UP6 607 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 KCNMB4Q86W47 210 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 RNF130Q86XS8 419 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 C10orf67Q8IYJ2 551 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ARL14Q8N4G2 192 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 OTUD6BQ8N6M0 293 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 RELL2Q8NC24 303 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 CCDC112Q8NEF3 446 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 OR1B1Q8NGR6 318 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 OR4F5Q8NH21 305 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 OR52J3Q8NH60 311 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 SHC3Q92529 594 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 DLX4Q92988 240 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ITFG2Q969R8 447 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ART5Q96L15 291 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 CCT7Q99832 543 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ATF6BQ99941 703 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 SLC30A2Q9BRI3 323 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 FEM1AQ9BSK4 669 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 UPF3AQ9H1J1 476 aaKnown RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PARLQ9H300 379 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ZDHHC18Q9NUE0 388 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 AGPAT5Q9NUQ2 364 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 DCAF13Q9NV06 445 aaKnown RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 GALPQ9UBC7 116 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 RNF14Q9UBS8 474 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 B9D1Q9UPM9 204 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 KLHDC2Q9Y2U9 406 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 E9PCH4 1651 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 GCC2Q8IWJ2 1684 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 TOP2BQ02880 1626 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 KDM5CP41229 1560 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 EPRSP07814 1512 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ANKRD36BQ8N2N9 1353 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ANKRD30BQ9BXX2 1392 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 IGHV4-30-2A0A087WSY4 118 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 IGHV3-38A0A0C4DH36 116 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 MBLAC1A4D2B0 266 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 GLTPD2A6NH11 291 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 TRIM64CA6NLI5 447 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ERVV-2B6SEH9 535 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 K7EQM0 130 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 NR5A2O00482 541 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 NTN3O00634 580 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 XPO1O14980 1071 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 TPST2O60704 377 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 MTX2O75431 263 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 SPAG6O75602 509 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ADCY5O95622 1261 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 IGSF6O95976 241 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 AMBPP02760 352 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 OR9G9P0C7N8 305 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 NEFHP12036 1026 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CYP11B1P15538 503 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 RPS2P15880 293 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 DRD5P21918 477 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 UCP1P25874 307 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 PTPN4P29074 926 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 RFC2P35250 354 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 DLSTP36957 453 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CAPGP40121 348 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 PGFP49763 221 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ARFIP1P53367 373 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 LRRC74AQ0VAA2 488 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 RIPK1Q13546 671 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 PDK3Q15120 406 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CDKN3Q16667 212 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CEP55Q53EZ4 464 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 FAM182AQ5T1J6 154 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CES3Q6UWW8 571 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 APOOLQ6UXV4 268 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 SYT10Q6XYQ8 523 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 GDPGP1Q6ZNW5 385 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 Q7L0L9 218 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 UNC5CLQ8IV45 518 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 NFAM1Q8NET5 270 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 STEAP2Q8NFT2 490 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 OR52M1Q8NGK5 317 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 PNPT1Q8TCS8 783 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 RAET1EQ8TD07 263 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms