RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GOLM1Q8NBJ4 401 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TMEM178AQ8NBL3 297 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 NUP43Q8NFH3 380 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 OR2M7Q8NG81 312 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 OR8J2Q8NGG1 315 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 OR9I1Q8NGQ6 314 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 RFWD2Q8NHY2 731 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 OR5P2Q8WZ92 322 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TMBIM1Q969X1 311 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TESCQ96BS2 214 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 OMA1Q96E52 524 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 SGCZQ96LD1 299 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 NODALQ96S42 347 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 LMF2Q9BU23 707 aaKnown RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 DPY30Q9C005 99 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TIMMDC1Q9NPL8 285 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 TUBA8Q9NY65 449 aaPredicted RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 MED12Q93074 2177 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 APCP25054 2843 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 ACOX3O15254 700 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 PPM1BO75688 479 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 SLITRK5O94991 958 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 IGKV1D-16P01601 117 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 ACP2P11117 423 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 ATP4BP51164 291 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 GABPB1Q06547 395 aaPredicted RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 ZNF155Q12901 538 aaPredicted RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 ELOAQ14241 798 aaKnown RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 FNDC7Q5VTL7 733 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 C1QL3Q5VWW1 255 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 FAM180AQ6UWF9 173 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 FGD2Q7Z6J4 655 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 SLC44A2Q8IWA5 706 aaPredicted RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 FBXW8Q8N3Y1 598 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 NATD1Q8N6N6 113 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 FBXO30Q8TB52 745 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 SPPL2AQ8TCT8 520 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 RNF138Q8WVD3 245 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 PIK3R3Q92569 461 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 TMEM125Q96AQ2 219 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 HSPBAP1Q96EW2 488 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 OTUB1Q96FW1 271 aaPredicted RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 PRPF18Q99633 342 aaKnown RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 SERHL2Q9H4I8 314 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 RUBCNLQ9H714 662 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 OLAHQ9NV23 265 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 GPATCH2Q9NW75 528 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 TAS2R9Q9NYW1 312 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 CFL2Q9Y281 166 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 KLF13Q9Y2Y9 288 aaPredicted RBP12.03□□□□□ -0.48
TPM3-216ENST00000473036 CSMD1Q96PZ7 3565 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 ADGRG4Q8IZF6 3080 aa12.03□□□□□ -0.48
TPM3-216ENST00000473036 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
TPM3-216ENST00000473036 EMC8O43402 210 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 RFPL3SP0C7P2 107 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 EDN3P14138 238 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 CNR1P21554 472 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 GPC1P35052 558 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 PRKAG1P54619 331 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 PER3P56645 1201 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 KCNK10P57789 538 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 DCAF7P61962 342 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 HSF1Q00613 529 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 FAM174BQ3ZCQ3 159 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 PDCD4Q53EL6 469 aaKnown RBP12.02□□□□□ -0.49
TPM3-216ENST00000473036 CMPK2Q5EBM0 449 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 SLC22A10Q63ZE4 541 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 MFSD12Q6NUT3 480 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 PAOXQ6QHF9 649 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 ZAR1Q86SH2 424 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 FUNDC1Q8IVP5 155 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 SLC16A11Q8NCK7 471 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 OR52N2Q8NGI0 321 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 OR5AK3PQ8NH89 298 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 ZFP28Q8NHY6 868 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 EFHD2Q96C19 240 aaPredicted RBP12.02□□□□□ -0.49
TPM3-216ENST00000473036 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 PHF12Q96QT6 1004 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 YIPF4Q9BSR8 244 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 INPP5KQ9BT40 448 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 TTTY12Q9BZ98 90 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 RTN4RQ9BZR6 473 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 SDR39U1Q9NRG7 319 aaPredicted RBP12.02□□□□□ -0.49
TPM3-216ENST00000473036 SACM1LQ9NTJ5 587 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 FBXO34Q9NWN3 711 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 KCNE3Q9Y6H6 103 aa12.02□□□□□ -0.49
TPM3-216ENST00000473036 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 ANKUB1A6NFN9 424 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 E9PBE3 544 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 NPIPA5E9PKD4 350 aa12.01□□□□□ -0.49
TPM3-216ENST00000473036 RNASET2O00584 256 aaKnown RBP12.01□□□□□ -0.49
TPM3-216ENST00000473036 HS6ST1O60243 411 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms