RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 IL6P05231 212 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 IL3P08700 152 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 KLK2P20151 261 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 DDCP20711 480 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ADH7P40394 386 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 BUD31P41223 144 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 MNAT1P51948 309 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 LIM2P55344 173 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 HNRNPH2P55795 449 aaKnown RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 NME5P56597 212 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TNFRSF17Q02223 184 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 C2orf80Q0P641 193 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 PDE7AQ13946 482 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 CYLC2Q14093 348 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF750Q32MQ0 723 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF585AQ6P3V2 769 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 OPN5Q6U736 354 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ARSKQ6UWY0 536 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 MSANTD1Q6ZTZ1 278 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 CAMKMTQ7Z624 323 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TREML1Q86YW5 311 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 LIX1LQ8IVB5 337 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 KRTCAP2Q8N6L1 136 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 NATD1Q8N6N6 113 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 FAM47BQ8NA70 645 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 OR10Q1Q8NGQ4 319 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 OR9I1Q8NGQ6 314 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 RP9Q8TA86 221 aaKnown RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 PTPMT1Q8WUK0 201 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 SARAFQ96BY9 339 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 PPCDCQ96CD2 204 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 SPDL1Q96EA4 605 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 EGLN2Q96KS0 407 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TEX37Q96LM6 180 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 CSF3RQ99062 836 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 POLDIP3Q9BY77 421 aaKnown RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 REEP4Q9H6H4 257 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 LIN28AQ9H9Z2 209 aaKnown RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 WDR41Q9HAD4 459 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 MIEF1Q9NQG6 463 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 DLL4Q9NR61 685 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 SACM1LQ9NTJ5 587 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 CCM2LQ9NUG4 571 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ATAD3AQ9NVI7 634 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 EHD3Q9NZN3 535 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 B4GALT7Q9UBV7 327 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ATP6V1HQ9UI12 483 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TAGLN3Q9UI15 199 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ST6GALNAC2Q9UJ37 374 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ASB4Q9Y574 426 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 PCDHGB3Q9Y5G1 929 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.08
SF3A1-206ENST00000471037 A0A1W2PP18 115 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 C1orf226A1L170 272 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CCDC154A6NI56 674 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 G3V3Y1 287 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CFLARO15519 480 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 PROM1O43490 865 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 AKAP10O43572 662 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF354AO60765 605 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 HNRNPCL1O60812 293 aaKnown RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ATP5HO75947 161 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 LRATO95237 230 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 AIFM1O95831 613 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 IFNA16P05015 189 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CELA3AP09093 270 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CCL3P10147 92 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 NR2F6P10588 404 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 COX4I1P13073 169 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 COX7A2P14406 83 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 GABRA1P14867 456 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CALB2P22676 271 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CPN2P22792 545 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 IL12AP29459 219 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 TLX1P31314 330 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 S100A3P33764 101 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 DNASE1L1P49184 302 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 MAN2A2P49641 1150 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 RNF4P78317 190 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 LRRC74AQ0VAA2 488 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 STX5Q13190 355 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 SERTAD2Q14140 314 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ZSCAN26Q16670 478 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 MPEG1Q2M385 716 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 FAM174BQ3ZCQ3 159 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 COQ5Q5HYK3 327 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 C1orf185Q5T7R7 199 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 WLSQ5T9L3 541 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CPTPQ5TA50 214 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 RIPPLY2Q5TAB7 128 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 SNX32Q86XE0 403 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF321PQ8N8H1 164 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 C7orf57Q8NEG2 295 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 OR8J2Q8NGG1 315 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 OR5L2Q8NGL0 311 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 SLC2A12Q8TD20 617 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms