RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 GSK3BP49841 420 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 NR0B1P51843 470 aaKnown RBP19.21■□□□□ 0.67
BRAF-202ENST00000469930 NRG3P56975 720 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 MRPS22P82650 360 aaKnown RBP19.21■□□□□ 0.67
BRAF-202ENST00000469930 MAPK11Q15759 364 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 MEP1AQ16819 746 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.21■□□□□ 0.67
BRAF-202ENST00000469930 VMACQ2NL98 169 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 CRB2Q5IJ48 1285 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 LRRC74BQ6ZQY2 392 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 ZZZ3Q8IYH5 903 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 SLC34A3Q8N130 599 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 C11orf65Q8NCR3 313 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 OR2T12Q8NG77 320 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 SLC22A8Q8TCC7 542 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 BRIX1Q8TDN6 353 aaKnown RBP19.21■□□□□ 0.67
BRAF-202ENST00000469930 JADE3Q92613 823 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 CDS1Q92903 461 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 RAB8BQ92930 207 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 DCBLD2Q96PD2 775 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 GAL3ST4Q96RP7 486 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 SDF2Q99470 211 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 CADM1Q9BY67 442 aaKnown RBP19.21■□□□□ 0.67
BRAF-202ENST00000469930 TEKT2Q9UIF3 430 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 KCNE3Q9Y6H6 103 aa19.21■□□□□ 0.67
BRAF-202ENST00000469930 CEP295Q9C0D2 2601 aa19.21■□□□□ 0.66
BRAF-202ENST00000469930 TMEM247A6NEH6 219 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 MASP2O00187 686 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 ABCB7O75027 752 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 IL33O95760 270 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 PCGF2P35227 344 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 PSMD4P55036 377 aaKnown RBP19.2■□□□□ 0.66
BRAF-202ENST00000469930 CASP9P55211 416 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 FUT5Q11128 374 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 CEACAM7Q14002 265 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 DECR1Q16698 335 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 CYP51A1Q16850 503 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 DEFB109BQ30KR1 87 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 IRAK1BP1Q5VVH5 260 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 LYPD8Q6UX82 237 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 WDR53Q7Z5U6 358 aaPredicted RBP19.2■□□□□ 0.66
BRAF-202ENST00000469930 PTRH1Q86Y79 214 aaKnown RBP19.2■□□□□ 0.66
BRAF-202ENST00000469930 GPALPP1Q8IXQ4 340 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 SLC38A5Q8WUX1 472 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 RASL10BQ96S79 203 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 G6PC3Q9BUM1 346 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 ZNF350Q9GZX5 532 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 CDCP1Q9H5V8 836 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 OR10H1Q9Y4A9 318 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 NPFFR2Q9Y5X5 522 aa19.2■□□□□ 0.66
BRAF-202ENST00000469930 APC2O95996 2303 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 GXYLT2A0PJZ3 443 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 ELOVL7A1L3X0 281 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 TSPAN2O60636 221 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 NUDT7P0C024 238 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 ITGA3P26006 1051 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 ABCD3P28288 659 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 PNLIPRP2P54317 469 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 CDK6Q00534 326 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 DCST2Q5T1A1 773 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 OPN5Q6U736 354 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 CCDC80Q76M96 950 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 MICU2Q8IYU8 434 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 FBXW8Q8N3Y1 598 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 BCORP1Q8N888 145 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 HIPK4Q8NE63 616 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 APOBEC4Q8WW27 367 aaKnown RBP19.19■□□□□ 0.66
BRAF-202ENST00000469930 PIK3R3Q92569 461 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 DIO2Q92813 273 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 LMF1Q96S06 567 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 THTPAQ9BU02 230 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 MUC13Q9H3R2 512 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 TRIM45Q9H8W5 580 aaPredicted RBP19.19■□□□□ 0.66
BRAF-202ENST00000469930 ASPMQ8IZT6 3477 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 NCOR2Q9Y618 2525 aa19.19■□□□□ 0.66
BRAF-202ENST00000469930 A0A0G2JPF8 293 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 OR6C70A6NIJ9 312 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 HNRNPCL2B2RXH8 293 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 HNRNPCL3B7ZW38 293 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 WWP2O00308 870 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 STX11O75558 287 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 ITGA10O75578 1167 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 DNAJB5O75953 348 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 FBXO45P0C2W1 286 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 HNRNPCL4P0DMR1 293 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 ME2P23368 584 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 ITPKBP27987 946 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 PGM1P36871 562 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 TMED10P49755 219 aaKnown RBP19.18■□□□□ 0.66
BRAF-202ENST00000469930 CRISP3P54108 245 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 BNIP2Q12982 314 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 ACER2Q5QJU3 275 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 INTS11Q5TA45 600 aaKnown RBP19.18■□□□□ 0.66
BRAF-202ENST00000469930 REEP3Q6NUK4 255 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 C16orf62Q7Z3J2 963 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 OR4N2Q8NGD1 307 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 KCTD14Q9BQ13 255 aaPredicted RBP19.18■□□□□ 0.66
BRAF-202ENST00000469930 RNF32Q9H0A6 362 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 URB1O60287 2271 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms