RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	LGI1	O95970	557 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	ITGAM	P11215	1152 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	CDH2	P19022	906 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	PRKAR1B	P31321	381 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	LIMS1	P48059	325 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	EMD	P50402	254 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	RHAG	Q02094	409 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	FUT7	Q11130	342 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	KCNAB2	Q13303	367 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	GPR68	Q15743	365 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	KDM4D	Q6B0I6	523 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	ZNF836	Q6ZNA1	936 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	USP51	Q70EK9	711 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	COX15	Q7KZN9	410 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	GALNT5	Q7Z7M9	940 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	RBM45	Q8IUH3	476 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	PEX5L	Q8IYB4	626 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	PHF10	Q8WUB8	498 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	RMND5B	Q96G75	393 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	WFDC6	Q9BQY6	131 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	RIBC2	Q9H4K1	309 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	PNO1	Q9NRX1	252 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	KRT84	Q9NSB2	600 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	ACER3	Q9NUN7	267 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	IFT52	Q9Y366	437 aa		11.44	□□□□□ -0.58
HDLBP-231	ENST00000467435	EFCAB7	A8K855	629 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	FFAR1	O14842	300 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	UGT2B17	O75795	530 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	SOX30	O94993	753 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	CCNB2	O95067	398 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	TIAF1	O95411	115 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	CLPS	P04118	112 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	DBI	P07108	87 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	GP1BA	P07359	652 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	THBS1	P07996	1170 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	RPS4Y1	P22090	263 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	ACP1	P24666	158 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	CSTF2	P33240	577 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PIGA	P37287	484 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	TPD52	P55327	224 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PSG6	Q00889	435 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	3e-9	■□□□□ 11.1
HDLBP-231	ENST00000467435	LARS2	Q15031	903 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	MICA	Q29983	383 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	EIPR1	Q53HC9	387 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	VWA2	Q5GFL6	755 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	FGD3	Q5JSP0	725 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	COLEC12	Q5KU26	742 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	TTC23	Q5W5X9	447 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	LAIR1	Q6GTX8	287 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PWWP2B	Q6NUJ5	590 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	TCTN3	Q6NUS6	607 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	FIGNL1	Q6PIW4	674 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	B3GNT8	Q7Z7M8	397 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PPP1R3B	Q86XI6	285 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	C7orf57	Q8NEG2	295 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	OR7G1	Q8NGA0	311 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	OR6T1	Q8NGN1	323 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	CLIP3	Q96DZ5	547 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	DHRS1	Q96LJ7	313 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PRRC1	Q96M27	445 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	VSTM2L	Q96N03	204 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	ALPK1	Q96QP1	1244 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PSD2	Q9BQI7	771 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	ITPA	Q9BY32	194 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	SAP130	Q9H0E3	1048 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	OR10A5	Q9H207	317 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	ZNF696	Q9H7X3	374 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	BATF3	Q9NR55	127 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	POLE3	Q9NRF9	147 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	FAM118A	Q9NWS6	357 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	OCIAD1	Q9NX40	245 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	KLHL28	Q9NXS3	571 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	CTSF	Q9UBX1	484 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	PRODH2	Q9UF12	536 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	ACAD8	Q9UKU7	415 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	DTX4	Q9Y2E6	619 aa		11.43	□□□□□ -0.58
HDLBP-231	ENST00000467435	NPIPA5	A0A0B4J1W7	369 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	CENPVL1	A0A0U1RR11	272 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	TCRBV16S1A1N1	A0A5B0	115 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	ARRDC5	A6NEK1	342 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	AGAP5	A6NIR3	686 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435		A8MUA0	341 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	NPIPA7	E9PJI5	369 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	BCKDK	O14874	412 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	PCDH17	O14917	1159 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	DYRK3	O43781	588 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	SEMA7A	O75326	666 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	SEC24D	O94855	1032 aa	Predicted RBP	11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	KCNK2	O95069	426 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	H1F0	P07305	194 aa	Known RBP	11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	HBQ1	P09105	142 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	NPIPA8	P0DM63	369 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	ANXA8	P13928	327 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	IL7R	P16871	459 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	FUT4	P22083	530 aa		11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	ELAVL4	P26378	380 aa	Known RBP	11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	TRHR	P34981	398 aa	Predicted RBP	11.42	□□□□□ -0.58
HDLBP-231	ENST00000467435	RFX3	P48380	749 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms