RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PRODH2Q9UF12 536 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 PIN4Q9Y237 131 aaKnown RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 NUDCQ9Y266 331 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 TTC26A0AVF1 554 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 A8MX80 341 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 SLC17A2O00624 439 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 ALOX15BO15296 676 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 GPAA1O43292 621 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 SDC3O75056 442 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 TGFAP01135 160 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 CYP11B1P15538 503 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 GAP43P17677 238 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 ARF4P18085 180 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 HSPA1LP34931 641 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 OR1D4P47884 311 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 SLC25A1P53007 311 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 SLC26A5P58743 744 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 BEND6Q5SZJ8 279 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 LGSNQ5TDP6 509 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 DMKNQ6E0U4 476 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 ZNF562Q6V9R5 426 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 ZBED8Q8IZ13 594 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 CD177Q8N6Q3 437 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 Q8N9G6 341 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 GTSF1Q8WW33 167 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 DNAJA3Q96EY1 480 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 SAMD8Q96LT4 415 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 OR5M11Q96RB7 305 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 KCNK16Q96T55 309 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 PAXXQ9BUH6 204 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 HCAR1Q9BXC0 346 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 OPN3Q9H1Y3 402 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 HSD3B7Q9H2F3 369 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 EXOSC3Q9NQT5 275 aaKnown RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 DUS2Q9NX74 493 aaKnown RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 DPM3Q9P2X0 92 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 GHRLQ9UBU3 117 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 HOOK1Q9UJC3 728 aaKnown RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 BARX2Q9UMQ3 279 aaPredicted RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 VSIG4Q9Y279 399 aa3.18□□□□□ -1.9
LRCH3-211ENST00000466054 EXOSC1Q9Y3B2 195 aaKnown RBP3.18□□□□□ -1.9
LRCH3-211ENST00000466054 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 FAM168BA1KXE4 195 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 KRT87PA6NCN2 255 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 FAM220BPB1ANY3 271 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 G3V3Y1 287 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 H3BMH7 237 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 LGALS8O00214 317 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 TSC22D2O75157 780 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 FASP25445 335 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 XCR1P46094 333 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 ALDH3B2P48448 385 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 POU3F4P49335 361 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 MEOX2P50222 304 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 EMDP50402 254 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 FUT7Q11130 342 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 RAB35Q15286 201 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 MEDAGQ5VYS4 303 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 PRSS48Q7RTY5 328 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 CCDC36Q8IYA8 594 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 FBXL16Q8N461 479 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 CNNM3Q8NE01 707 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 PINX1Q96BK5 328 aaKnown RBP3.17□□□□□ -1.9
LRCH3-211ENST00000466054 SERAC1Q96JX3 654 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 RAB17Q9H0T7 212 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 TRPV5Q9NQA5 729 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 P2RX2Q9UBL9 471 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
LRCH3-211ENST00000466054 IGKV6D-21A0A0A0MT36 114 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 IGHV3-35A0A0C4DH35 117 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 PDXKO00764 312 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 IMPA2O14732 288 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 TM9SF1O15321 606 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 PRPSAP2O60256 369 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 ZCCHC18P0CG32 403 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 SDC1P18827 310 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CCNA2P20248 432 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 DNAJB1P25685 340 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 MAPK3P27361 379 aaPredicted RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CCND2P30279 289 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 MDH2P40926 338 aaKnown RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 RABIFP47224 123 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CXCL6P80162 114 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CAMK4Q16566 473 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 GSG1Q2KHT4 349 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 PRR30Q53SZ7 412 aaPredicted RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 RAET1GQ6H3X3 334 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 IRGCQ6NXR0 463 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 HACD2Q6Y1H2 254 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CERS5Q8N5B7 392 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 ZNF525Q8N782 197 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 FCGR1BQ92637 280 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 MRPL38Q96DV4 380 aaKnown RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 ELOVL4Q9GZR5 314 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 SOHLH2Q9NX45 425 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 ELOVL2Q9NXB9 296 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 GDAP2Q9NXN4 497 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 GALPQ9UBC7 116 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms