RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 IFT52Q9Y366 437 aa5.6□□□□□ -1.51
CHMP3-206ENST00000466032 EP300Q09472 2414 aaPredicted RBP5.6□□□□□ -1.51
CHMP3-206ENST00000466032 SEC16AO15027 2179 aa5.6□□□□□ -1.51
CHMP3-206ENST00000466032 KNTC1P50748 2209 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CROCCQ5TZA2 2017 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ADAMTS20P59510 1910 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SPAARA0A1B0GVQ0 90 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SAGE2PA6NJ88 616 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CDRT15L2A8MXV6 281 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 FAM227AF5H4B4 570 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CXCR6O00574 342 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PEX12O00623 359 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CASC3O15234 703 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 HNRNPRO43390 633 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 STX11O75558 287 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CREG1O75629 220 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 NKX2-2O95096 273 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TNFSF15O95150 251 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TIAF1O95411 115 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 C8BP07358 591 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CTSBP07858 339 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TFPTP0C1Z6 253 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 NR2F1P10589 423 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 LIPCP11150 499 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ITIH1P19827 911 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TCN2P20062 427 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 MAOAP21397 527 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DRD5P21918 477 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 KDELR2P33947 212 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TRHRP34981 398 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PLA2G5P39877 138 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 VHLP40337 213 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 MAP3K8P41279 467 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 STAT5AP42229 794 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TMED10P49755 219 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CDK9P50750 372 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 GZMMP51124 257 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 MVDP53602 400 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PRKAG1P54619 331 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ARPC4P59998 168 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 GABREP78334 506 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 RPP38P78345 283 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 POU6F2P78424 691 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 BTG2P78543 158 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CDK6Q00534 326 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CHRNB3Q05901 458 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 MGAT2Q10469 447 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 GAB1Q13480 694 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SCARB2Q14108 478 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ZNF267Q14586 743 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PUM1Q14671 1186 aaKnown RBP eCLIP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 LASP1Q14847 261 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DECR1Q16698 335 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SYT16Q17RD7 645 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ARHGAP11BQ3KRB8 267 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 VWA2Q5GFL6 755 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 FAM219BQ5XKK7 198 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 THOC7Q6I9Y2 204 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 HEPHL1Q6MZM0 1159 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 HSDL2Q6YN16 418 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 EIF3MQ7L2H7 374 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 NDUFAF7Q7L592 441 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DGLUCYQ7Z3D6 616 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 C16orf62Q7Z3J2 963 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SZRD1Q7Z422 152 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CPEB2Q7Z5Q1 589 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ANKRD37Q7Z713 158 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 IFNEQ86WN2 208 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ARMC8Q8IUR7 673 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 OR4N5Q8IXE1 308 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CMIPQ8IY22 773 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TAGAPQ8N103 731 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 COX18Q8N8Q8 333 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ZNF527Q8NB42 609 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SLC38A9Q8NBW4 561 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TMEM52Q8NDY8 209 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CHDHQ8NE62 594 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 B3GNT7Q8NFL0 401 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 OR7G2Q8NG99 324 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 FBXO27Q8NI29 283 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 M1APQ8TC57 530 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SPPL2AQ8TCT8 520 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SLC26A7Q8TE54 656 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PTPMT1Q8WUK0 201 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 WDR60Q8WVS4 1066 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 XAGE5Q8WWM1 108 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 UTP4Q969X6 686 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 FAM162AQ96A26 154 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CCDC124Q96CT7 223 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SENP5Q96HI0 755 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 BTBD9Q96Q07 612 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SLC39A3Q9BRY0 314 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 OSBPL10Q9BXB5 764 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SEMA4CQ9C0C4 833 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 POLR2J2Q9GZM3 115 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 POLR2J3Q9H1A7 115 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms