RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CEACAM8P31997 349 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-206ENST00000464750 PNLIPRP2P54317 469 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 IFFO1Q0D2I5 559 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 KANK2Q63ZY3 851 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 NSUN5P2Q63ZY6 315 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 RNF165Q6ZSG1 346 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 RELL2Q8NC24 303 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-206ENST00000464750 RNF138Q8WVD3 245 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 TRIB1Q96RU8 372 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 ZNF559Q9BR84 538 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 TUBB1Q9H4B7 451 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 KCNN3Q9UGI6 736 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 LGALS13Q9UHV8 139 aa23.54■■□□□ 1.36
U2AF1-206ENST00000464750 UPK1AO00322 258 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 DVL2O14641 736 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 PSMG1O95456 288 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 CHEK2O96017 543 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 CAPN3P20807 821 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 BMP5P22003 454 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 ALDH3A1P30838 453 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 TIMP3P35625 211 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 DLX5P56178 289 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 RPL38P63173 70 aaKnown RBP23.53■■□□□ 1.36
U2AF1-206ENST00000464750 MRPS22P82650 360 aaKnown RBP23.53■■□□□ 1.36
U2AF1-206ENST00000464750 MYBPHQ13203 477 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 Q6ZSR9 355 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 OR2L13Q8N349 312 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 GFM2Q969S9 779 aaKnown RBP23.53■■□□□ 1.36
U2AF1-206ENST00000464750 FCRL1Q96LA6 429 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 CCT7Q99832 543 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 MECRQ9BV79 373 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 SLC24A3Q9HC58 644 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 SLC17A7Q9P2U7 560 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 FBXL2Q9UKC9 423 aa23.53■■□□□ 1.36
U2AF1-206ENST00000464750 ANKHD1Q8IWZ3 2542 aaKnown RBP23.52■■□□□ 1.36
U2AF1-206ENST00000464750 PDPK1O15530 556 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 SPAG7O75391 227 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 IL2RAP01589 272 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 CHRNGP07510 517 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 CYP4B1P13584 511 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 SDC1P18827 310 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 GRK2P25098 689 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 SRD5A2P31213 254 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 ANKRD26P1Q6NSI1 321 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 IFNEQ86WN2 208 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 AENQ8WTP8 325 aaKnown RBP23.52■■□□□ 1.36
U2AF1-206ENST00000464750 ELP4Q96EB1 424 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 DTNBP1Q96EV8 351 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 TAS2R10Q9NYW0 307 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 DKKL1Q9UK85 242 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 L3MBTL1Q9Y468 752 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 DNAJC15Q9Y5T4 150 aa23.52■■□□□ 1.36
U2AF1-206ENST00000464750 AKAP9Q99996 3911 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 CD8B2A6NJW9 211 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 TMEM233B4DJY2 109 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 NPHS1O60500 1241 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 LINC00032P0C843 101 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 EVI2BP34910 448 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 ZNF136P52737 540 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 GAS1P54826 345 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 HSPB3Q12988 150 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 RCAN2Q14206 197 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 CYP27C1Q4G0S4 372 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 OR5M10Q6IEU7 315 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 ZNF551Q7Z340 670 aaPredicted RBP23.51■■□□□ 1.35
U2AF1-206ENST00000464750 TSSK3Q96PN8 268 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 Q9N2J8 555 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 CBLCQ9ULV8 474 aa23.51■■□□□ 1.35
U2AF1-206ENST00000464750 MBD3L4A6NDZ8 208 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 MBD3L3A6NE82 208 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 MBD3L5A6NJ08 208 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 AKAP10O43572 662 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 SCO2O43819 266 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 IFI6P09912 130 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ASCL1P50553 236 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ZNHIT3Q15649 155 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ARL13AQ5H913 290 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 EMBQ6PCB8 327 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ENPP6Q6UWR7 440 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 CDH24Q86UP0 819 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 TRIM42Q8IWZ5 723 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 DDIASQ8IXT1 998 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 CLHC1Q8NHS4 586 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 MBD3L2Q8NHZ7 208 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 TCP10LQ8TDR4 215 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 TWIST2Q8WVJ9 160 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 CIDECQ96AQ7 238 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 PPCDCQ96CD2 204 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ZNF764Q96H86 408 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 LMF2Q9BU23 707 aaKnown RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ROPN1BQ9BZX4 212 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ROPN1Q9HAT0 212 aaPredicted RBP23.5■■□□□ 1.35
U2AF1-206ENST00000464750 ITGB1BP2Q9UKP3 347 aa23.5■■□□□ 1.35
U2AF1-206ENST00000464750 C17orf51A8MQB3 221 aa23.49■■□□□ 1.35
U2AF1-206ENST00000464750 B4DXG7 233 aa23.49■■□□□ 1.35
U2AF1-206ENST00000464750 H0Y3Z8 333 aa23.49■■□□□ 1.35
U2AF1-206ENST00000464750 LSM1O15116 133 aaKnown RBP23.49■■□□□ 1.35
U2AF1-206ENST00000464750 CPN1P15169 458 aa23.49■■□□□ 1.35
U2AF1-206ENST00000464750 TCEA1P23193 301 aaKnown RBP23.49■■□□□ 1.35
U2AF1-206ENST00000464750 UQCRC1P31930 480 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms