RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 PRRG4Q9BZD6 226 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 DSN1Q9H410 356 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 CES1P1Q9UKY3 287 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 EMC9Q9Y3B6 208 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 ZNF337Q9Y3M9 751 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 RAI1Q7Z5J4 1906 aaPredicted RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 MED12Q93074 2177 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 H3BML4 177 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 TSPAN2O60636 221 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
SMC1A-204ENST00000463684 MTHFD2P13995 350 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 PCSK2P16519 638 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 PNLIPRP2P54317 469 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
SMC1A-204ENST00000463684 CTBP2P56545 445 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 PSPHP78330 225 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 GUSBP1Q15486 140 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
SMC1A-204ENST00000463684 ALKBH2Q6NS38 261 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 PPP4R4Q6NUP7 873 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 STAC2Q6ZMT1 411 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 GOLGA7Q7Z5G4 137 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 OR6K3Q8NGY3 331 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 RHEBL1Q8TAI7 183 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 NXNL1Q96CM4 212 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 KLHL29Q96CT2 875 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 MRPL1Q9BYD6 325 aaKnown RBP13□□□□□ -0.33
SMC1A-204ENST00000463684 PTGES2Q9H7Z7 377 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 SDHAF3Q9NRP4 125 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 SNX12Q9UMY4 172 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 ACOT9Q9Y305 439 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
SMC1A-204ENST00000463684 NBEAL1Q6ZS30 2694 aa13□□□□□ -0.33
SMC1A-204ENST00000463684 OVOL3O00110 214 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 FAM157CP0CG43 387 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 ACVR1BP36896 505 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 GAS1P54826 345 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 CLDN20P56880 219 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 MRPS35P82673 323 aaKnown RBP12.99□□□□□ -0.33
SMC1A-204ENST00000463684 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
SMC1A-204ENST00000463684 LTB4RQ15722 352 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 FRG2Q64ET8 278 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 BEND4Q6ZU67 534 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 C3orf62Q6ZUJ4 267 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 CYS1Q717R9 158 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 METTL4Q8N3J2 472 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 OR2M3Q8NG83 312 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 FBXW5Q969U6 566 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 BTBD9Q96Q07 612 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 FRG2BQ96QU4 278 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 TACO1Q9BSH4 297 aaKnown RBP12.99□□□□□ -0.33
SMC1A-204ENST00000463684 ACTR6Q9GZN1 396 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 OR10A4Q9H209 315 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 SLCO5A1Q9H2Y9 848 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 PFDN4Q9NQP4 134 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 CUBNO60494 3623 aa12.99□□□□□ -0.33
SMC1A-204ENST00000463684 TCRBV9S1A1TA0A576 114 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CCDC189A1A4V9 331 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 OR2M5A3KFT3 312 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 FAM159BA6NKW6 160 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 HAX1O00165 279 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 SCO2O43819 266 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 AQP8O94778 261 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CT45A8P0DMV1 189 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CT45A9P0DMV2 189 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CDKN1AP38936 164 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 ALDH9A1P49189 494 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CORO7P57737 925 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 IFT88Q13099 833 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 FAM83EQ2M2I3 478 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 ERCC6LQ2NKX8 1250 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CT45A2Q5DJT8 189 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 ADAM5Q6NVV9 412 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 METTL2BQ6P1Q9 378 aaKnown RBP12.98□□□□□ -0.33
SMC1A-204ENST00000463684 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 SLC35F6Q8N357 371 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 FADS6Q8N9I5 356 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 OR5M1Q8NGP8 315 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 SMAP2Q8WU79 429 aaPredicted RBP12.98□□□□□ -0.33
SMC1A-204ENST00000463684 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
SMC1A-204ENST00000463684 GMPPAQ96IJ6 420 aaPredicted RBP12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 FAIM2Q9BWQ8 316 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 NOL11Q9H8H0 719 aaKnown RBP12.98□□□□□ -0.33
SMC1A-204ENST00000463684 MED11Q9P086 117 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 CDC42EP3Q9UKI2 254 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms