RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 A0A1B0GTQ1 180 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 A0A1W2PP18 115 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 OR2A25A4D2G3 310 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 OR2W5A6NFC9 320 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 LILRA5A6NI73 299 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 PROB1E7EW31 1015 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 MRASO14807 208 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 ANGPT2O15123 496 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CFLARO15519 480 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 TMPRSS11DO60235 418 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 PCDH7O60245 1069 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 DFNA5O60443 496 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 TBX6O95947 436 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 IL6P05231 212 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 KLK1P06870 262 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 PROS1P07225 676 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 MAGP20916 626 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 PRPS1L1P21108 318 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 TIA1P31483 386 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 HOXD12P35452 270 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 NBL1P41271 181 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 ASMTP46597 345 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 RAP1GDS1P52306 607 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 DGKQP52824 942 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 NANOS3P60323 173 aaKnown RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 RPS15AP62244 130 aaKnown RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 ZIC1Q15915 447 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 HLA-BQ31612 363 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 AASDHQ4L235 1098 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 COQ5Q5HYK3 327 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 COMMD6Q7Z4G1 85 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 BCDIN3DQ7Z5W3 292 aaKnown RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 DEFB107AQ8IZN7 70 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 KRTCAP2Q8N6L1 136 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 ARL10Q8N8L6 244 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 PCYOX1LQ8NBM8 494 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 MFSD9Q8NBP5 474 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CREB3L4Q8TEY5 395 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 RSC1A1Q92681 617 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 VPS33AQ96AX1 596 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 FAM122AQ96E09 287 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 EGLN2Q96KS0 407 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CENPKQ9BS16 269 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 THTPAQ9BU02 230 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 MS4A8Q9BY19 250 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 MMADHCQ9H3L0 296 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CLMPQ9H6B4 373 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 WDR41Q9HAD4 459 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 SAP30LQ9HAJ7 183 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 FSCN3Q9NQT6 498 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 GID8Q9NWU2 228 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 LEF1Q9UJU2 399 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 KLK4Q9Y5K2 254 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 TNRC6BQ9UPQ9 1833 aaKnown RBP6.89□□□□□ -1.31
UBE4B-204ENST00000462658 CEP192Q8TEP8 1941 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 THADAQ6YHU6 1953 aa6.89□□□□□ -1.31
UBE4B-204ENST00000462658 KNL1Q8NG31 2342 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 GNG14A0A1W2PPG7 69 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ASPDHA6ND91 283 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 LRIT2A6NDA9 550 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 J3KTA2 159 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PLPP1O14494 284 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PCDH17O14917 1159 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 YKT6O15498 198 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 NDUFS4O43181 175 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 CTSVO60911 334 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 EEDO75530 441 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SEMA3DO95025 777 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 LRATO95237 230 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 STATHP02808 62 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 GBAP04062 536 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ALPPL2P10696 532 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 APEHP13798 732 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PVRP15151 417 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 CDH3P22223 829 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 EPHA8P29322 1005 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 HNRNPH1P31943 449 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 S100A3P33764 101 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 BSGP35613 385 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PSME3P61289 254 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ELF3P78545 371 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 RELAQ04206 551 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 LPAL2Q16609 132 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 HKDC1Q2TB90 917 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 FAM174BQ3ZCQ3 159 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 TMEM35AQ53FP2 167 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PAGE3Q5JUK9 113 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 CCNYL2Q5T2Q4 361 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 FCRLBQ6BAA4 426 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 OR4C11Q6IEV9 310 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 IRGCQ6NXR0 463 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 HACD2Q6Y1H2 254 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF788Q6ZQV5 615 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PAGE2Q7Z2X7 111 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 GATAD2AQ86YP4 633 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms