RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 AMDHD1Q96NU7 426 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 FAM111AQ96PZ2 611 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 OSBPL11Q9BXB4 747 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 PRDM14Q9GZV8 571 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 LRTM1Q9HBL6 345 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-210ENST00000462125 ALKBH4Q9NXW9 302 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 SLC17A7Q9P2U7 560 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 Q9UFV3 132 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 TRAF6Q9Y4K3 522 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 PTGDR2Q9Y5Y4 395 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 CACNA1CQ13936 2221 aa12.06□□□□□ -0.48
C9orf3-210ENST00000462125 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 C15orf38-AP3S2A0A0A6YYH1 394 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 UPK1AO00322 258 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 LSM1O15116 133 aaKnown RBP12.05□□□□□ -0.48
C9orf3-210ENST00000462125 TYROBPO43914 113 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 COQ9O75208 318 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 CHRNGP07510 517 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 NEFHP12036 1026 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 CREB1P16220 341 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 BMP7P18075 431 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 SSTR2P30874 369 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 SERPINB5P36952 375 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.486e-7■■■■■ 27.1
C9orf3-210ENST00000462125 EFR3AQ14156 821 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 CYP27C1Q4G0S4 372 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 EIPR1Q53HC9 387 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 ANGPTL8Q6UXH0 198 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 LIX1LQ8IVB5 337 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 PM20D2Q8IYS1 436 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 OR4N2Q8NGD1 307 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 ADOQ96SZ5 270 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 CCT7Q99832 543 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 EML4Q9HC35 981 aaKnown RBP12.05□□□□□ -0.48
C9orf3-210ENST00000462125 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 SLC6A5Q9Y345 797 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 TMED5Q9Y3A6 229 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 MRPS18CQ9Y3D5 142 aaKnown RBP12.05□□□□□ -0.48
C9orf3-210ENST00000462125 ABCA12Q86UK0 2595 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 CREBBPQ92793 2442 aa12.05□□□□□ -0.48
C9orf3-210ENST00000462125 NKX2-6A6NCS4 301 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 PRAMEF25A6NGN4 478 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 SPAG7O75391 227 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 CHEK2O96017 543 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 ACTL6AO96019 429 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 LINC00032P0C843 101 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 CPN1P15169 458 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 SDC1P18827 310 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 MSX1P28360 303 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 TIMP3P35625 211 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 MC3RP41968 323 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 FRKP42685 505 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 ETV4P43268 484 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 GAS1P54826 345 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 GAB1Q13480 694 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 SF3B4Q15427 424 aaKnown RBP eCLIP12.04□□□□□ -0.481e-8■■□□□ 12.9
C9orf3-210ENST00000462125 WIPI1Q5MNZ9 446 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 TMEM107Q6UX40 140 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 LARP4Q71RC2 724 aaKnown RBP eCLIP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 PLCZ1Q86YW0 608 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 SLC44A2Q8IWA5 706 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 DMRTC2Q8IXT2 367 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 FAM83FQ8NEG4 500 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 CDC26Q8NHZ8 85 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 HOXB13Q92826 284 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 ABTB1Q969K4 478 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 WDYHV1Q96HA8 205 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 LMF2Q9BU23 707 aaKnown RBP12.04□□□□□ -0.48
C9orf3-210ENST00000462125 MECRQ9BV79 373 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 UGT2B28Q9BY64 529 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 OR2B2Q9GZK3 357 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 REEP4Q9H6H4 257 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 KLRF1Q9NZS2 232 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 FREM3P0C091 2139 aa12.04□□□□□ -0.48
C9orf3-210ENST00000462125 EXPH5Q8NEV8 1989 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 CD8B2A6NJW9 211 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 FAM90A27PA6NNH2 459 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 HSPB2A8KAH6 182 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 BPGMP07738 259 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 NTSP30990 170 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 LSP1P33241 339 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 KRT20P35900 424 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 MAP3K8P41279 467 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 SLC18A1P54219 525 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 MRPS22P82650 360 aaKnown RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 PDE7AQ13946 482 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 TOMM20Q15388 145 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 HSPB2Q16082 182 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 ACSF3Q4G176 576 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 NSUN5P2Q63ZY6 315 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 ZNF551Q7Z340 670 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 YRDCQ86U90 279 aaKnown RBP12.03□□□□□ -0.48
C9orf3-210ENST00000462125 ZPLD1Q8TCW7 415 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 TWIST2Q8WVJ9 160 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 ZBTB9Q96C00 473 aa12.03□□□□□ -0.48
C9orf3-210ENST00000462125 MTERF3Q96E29 417 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms