RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HGDQ93099 445 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 EFHD2Q96C19 240 aaPredicted RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 MTERF3Q96E29 417 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 TMEM41AQ96HV5 264 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 NODALQ96S42 347 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 ADOQ96SZ5 270 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 SLC6A15Q9H2J7 730 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 GALNT9Q9HCQ5 603 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 Q9N2J8 555 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 QPCTLQ9NXS2 382 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 PCNX1Q96RV3 2341 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 OR6C70A6NIJ9 312 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 C19orf84I3L1E1 186 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 PRF1P14222 555 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ELAVL4P26378 380 aaKnown RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 ACVR2AP27037 513 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 RFX3P48380 749 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 CDK9P50750 372 aaKnown RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 PRKAG1P54619 331 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 NUP107P57740 925 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 MRPS22P82650 360 aaKnown RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 BST1Q10588 318 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 PMPCAQ10713 525 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 SLC30A6Q6NXT4 461 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ACAD11Q709F0 780 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 WDR53Q7Z5U6 358 aaPredicted RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 OR7A2PQ8NGA2 310 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 OR1J4Q8NGS1 313 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 SLC35A4Q96G79 324 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 SORT1Q99523 831 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 PRPF18Q99633 342 aaKnown RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 ACKR4Q9NPB9 350 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ACSS1Q9NUB1 689 aaPredicted RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 ATAD3AQ9NVI7 634 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ALKBH4Q9NXW9 302 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 NOP53Q9NZM5 478 aaKnown RBP14.07□□□□□ -0.16
VARS-219ENST00000461328 SPRR3Q9UBC9 169 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ATP6V1HQ9UI12 483 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 MAPRE3Q9UPY8 281 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 RNF6Q9Y252 685 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ITPR2Q14571 2701 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 ZNF407Q9C0G0 2248 aa14.07□□□□□ -0.16
VARS-219ENST00000461328 C15orf38-AP3S2A0A0A6YYH1 394 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 C2orf72A6NCS6 295 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 ICOSLGO75144 302 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 PRPS1L1P21108 318 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 ENDOUP21128 410 aaKnown RBP14.06□□□□□ -0.16
VARS-219ENST00000461328 CHRNB4P30926 498 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 SNTA1Q13424 505 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 DECR1Q16698 335 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 CPTPQ5TA50 214 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 B3GNT6Q6ZMB0 384 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 CCDC71Q8IV32 467 aaPredicted RBP14.06□□□□□ -0.16
VARS-219ENST00000461328 OR4N2Q8NGD1 307 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 NEIL3Q8TAT5 605 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 FBXO30Q8TB52 745 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 TLCD1Q96CP7 247 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 CHMP6Q96FZ7 201 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 MS4A4EQ96PG1 132 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 NUF2Q9BZD4 464 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 C20orf27Q9GZN8 174 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 C3orf14Q9HBI5 128 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 ARGLU1Q9NWB6 273 aaPredicted RBP14.06□□□□□ -0.16
VARS-219ENST00000461328 MRTO4Q9UKD2 239 aaKnown RBP14.06□□□□□ -0.16
VARS-219ENST00000461328 CBLCQ9ULV8 474 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 SNX8Q9Y5X2 465 aa14.06□□□□□ -0.16
VARS-219ENST00000461328 FAM90A27PA6NNH2 459 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 SNPHO15079 494 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 TSPAN2O60636 221 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 WDR1O75083 606 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 PSMG1O95456 288 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 IFI6P09912 130 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 LAMP1P11279 417 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 G6PDP11413 515 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 GABRA3P34903 492 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 GCKP35557 465 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 WDR4P57081 412 aaKnown RBP14.05□□□□□ -0.16
VARS-219ENST00000461328 PRR5P85299 388 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 PSG6Q00889 435 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 EMX2Q04743 252 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 SPDYE7PQ495Y7 208 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 VPS26BQ4G0F5 336 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 ATG16L1Q676U5 607 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 TIGD3Q6B0B8 471 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 TMEM81Q6P7N7 255 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 GDF7Q7Z4P5 450 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 TRIM42Q8IWZ5 723 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 KRTCAP2Q8N6L1 136 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 NUP43Q8NFH3 380 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 OR10Q1Q8NGQ4 319 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 CEP70Q8NHQ1 597 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 GPR151Q8TDV0 419 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 SLC9A6Q92581 669 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 JADE3Q92613 823 aa14.05□□□□□ -0.16
VARS-219ENST00000461328 TTYH2Q9BSA4 534 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms