RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TMEM44Q2T9K0 475 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF628Q5EBL2 1059 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 TCTE1Q5JU00 501 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 MEDAGQ5VYS4 303 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FRMPD2BQ6IN97 320 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 KLHL17Q6TDP4 642 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 DNAJC22Q8N4W6 341 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 OR9Q2Q8NGE9 314 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 SLC6A18Q96N87 628 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 MACROD1Q9BQ69 325 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 C14orf105Q9NVL8 296 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 CDC14AQ9UNH5 594 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 WDFY3Q8IZQ1 3526 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 LAMA1P25391 3075 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 TRBV23OR9-2A0A075B6M9 112 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 TRBV4-1A0A0J9YWV2 114 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 A0A1W2PR77 199 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PRAMEF27A3QJZ7 478 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CLDN24A6NM45 220 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SNTNA6NMZ2 147 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 J3KTA2 159 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 AP3D1O14617 1153 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 FFAR1O14842 300 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 XPNPEP2O43895 674 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 FMO6PO60774 539 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PRKRAO75569 313 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 OR5F1O95221 314 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CDK1P06493 297 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 ALOX5P09917 674 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SLC35E2P0CK97 266 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CEACAM1P13688 526 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 GABRB1P18505 474 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CTSKP43235 329 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SERPINB10P48595 397 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 NOVA1P51513 510 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 DUSP8Q13202 625 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 DCTN2Q13561 401 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 RUNX2Q13950 521 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PTGES3Q15185 160 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 C17orf82Q86X59 251 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF595Q8IYB9 648 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 OR8J1Q8NGP2 316 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF285Q96NJ3 590 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
ERCC3-205ENST00000460485 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 DSPP15924 2871 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 SETXQ7Z333 2677 aaKnown RBP13.19□□□□□ -0.3
ERCC3-205ENST00000460485 TLCD2A6NGC4 264 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 B4DGG1 531 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 LMO7DNF2Z398 122 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 TLR4O00206 839 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 CYR61O00622 381 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 BCL10O95999 233 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 STATHP02808 62 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 MT-ND2P03891 347 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 RNH1P13489 461 aaKnown RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 CHMP24386 653 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 ACVR2AP27037 513 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 PCSK6P29122 969 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 GALNSP34059 522 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 DUSP2Q05923 314 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 NFATC3Q12968 1075 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 PRTGQ2VWP7 1150 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 PGBD2Q6P3X8 592 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms