RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LHX4Q969G2 390 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 TOMM40LQ969M1 308 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 NCLNQ969V3 563 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 SLC25A36Q96CQ1 311 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 RAB3CQ96E17 227 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 PSMB7Q99436 277 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 FAM173AQ9BQD7 235 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 WRAP53Q9BUR4 548 aaKnown RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 PUS3Q9BZE2 481 aaKnown RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 KRT23Q9C075 422 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 TMEM231Q9H6L2 316 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 ALG9Q9H6U8 611 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 AMBNQ9NP70 447 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CLEC5AQ9NY25 188 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 RCOR3Q9P2K3 495 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 ZNF490Q9ULM2 529 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 ATRNO75882 1429 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 NKTRP30414 1462 aaKnown RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 MLH3Q9UHC1 1453 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 DLC1Q96QB1 1528 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 PDE4DIPQ5VU43 2346 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ADGRB2O60241 1585 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 TIAM1Q13009 1591 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 PLCH2O75038 1416 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 PTCH1Q13635 1447 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 SETD5Q9C0A6 1442 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 RNF222A6NCQ9 220 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 FBLL1A6NHQ2 334 aaKnown RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 E9PMD0 336 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 K7ERI5 159 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 SGK494L7N484 410 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 RANBP6O60518 1105 aaKnown RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 SH3BGRLO75368 114 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 PDE5AO76074 875 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 HOXB7P09629 217 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 RALAP11233 206 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 IGFBP5P24593 272 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ELK3P41970 407 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ASMTP46597 345 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 SLC8A3P57103 927 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 DSCR10P59022 87 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 GSTO1P78417 241 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 SPP2Q13103 211 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 SMC1AQ14683 1233 aaKnown RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 LTB4RQ15722 352 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 CEBPEQ15744 281 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ACER2Q5QJU3 275 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 C12orf60Q5U649 245 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 IRGCQ6NXR0 463 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ABRAXAS1Q6UWZ7 409 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ISLR2Q6UXK2 745 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 GPBP1Q86WP2 473 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 OR4F17Q8NGA8 305 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 WDR36Q8NI36 951 aaKnown RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 MCHR2Q969V1 340 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 OR4F4Q96R69 305 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 APOOQ9BUR5 198 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 NACA2Q9H009 215 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ZBP1Q9H171 429 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 TSPY26PQ9H489 355 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ROPN1Q9HAT0 212 aaPredicted RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 NGBQ9NPG2 151 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ABCC13Q9NSE7 274 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 CENPMQ9NSP4 180 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 GPR83Q9NYM4 423 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 BCAP29Q9UHQ4 241 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 HOOK1Q9UJC3 728 aaKnown RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 RNF24Q9Y225 148 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 MTF2Q9Y483 593 aaPredicted RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 RNF115Q9Y4L5 304 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 ABCA6Q8N139 1617 aa2.63□□□□□ -1.99
RFC4-211ENST00000460408 PRDM15P57071 1507 aaPredicted RBP2.63□□□□□ -1.99
RFC4-211ENST00000460408 ATP10DQ9P241 1426 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZNF840PA6NDX5 716 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZNF487B1APH4 448 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 H3BMH7 237 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 PDXKO00764 312 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 EI24O14681 340 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 IMPA2O14732 288 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 CFLARO15519 480 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 BCL2L11O43521 198 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZNF354AO60765 605 aaPredicted RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZNF253O75346 499 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 KBTBD11O94819 623 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 GOT2P00505 430 aaKnown RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 HPP00738 406 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 SNRPCP09234 159 aaKnown RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 WNT2P09544 360 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 FAM200BP0CF97 657 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 HSD17B1P14061 328 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 PPP2R1BP30154 601 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 CCND2P30279 289 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 CHRNA3P32297 505 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RFC2P35250 354 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 POU3F4P49335 361 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RAG2P55895 527 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZP4Q12836 540 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 SLC1A5Q15758 541 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 PARP6Q2NL67 630 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms