RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SH2D4BQ5SQS7 431 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 LARP4Q71RC2 724 aaKnown RBP eCLIP7.1□□□□□ -1.27
HPS4-207ENST00000459918 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 KLHL7Q8IXQ5 586 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 SLC35F6Q8N357 371 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 EFHD2Q96C19 240 aaPredicted RBP7.1□□□□□ -1.27
HPS4-207ENST00000459918 MARK4Q96L34 752 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 OSBPL9Q96SU4 736 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 SERPINI1Q99574 410 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 RHNO1Q9BSD3 238 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 SHARPINQ9H0F6 387 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 SLCO5A1Q9H2Y9 848 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 ESRP2Q9H6T0 727 aaKnown RBP7.1□□□□□ -1.27
HPS4-207ENST00000459918 C12orf49Q9H741 205 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 IPPKQ9H8X2 491 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 FOLH1BQ9HBA9 442 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 PLAC1Q9HBJ0 212 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 NMRAL1Q9HBL8 299 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 BARX1Q9HBU1 254 aaPredicted RBP7.1□□□□□ -1.27
HPS4-207ENST00000459918 NGBQ9NPG2 151 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 SDHAF3Q9NRP4 125 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 STOML1Q9UBI4 398 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 PSME2Q9UL46 239 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 CLEC4AQ9UMR7 237 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 LIPT1Q9Y234 373 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 ZNF175Q9Y473 711 aa7.1□□□□□ -1.27
HPS4-207ENST00000459918 MAGED1Q9Y5V3 778 aaPredicted RBP7.1□□□□□ -1.27
HPS4-207ENST00000459918 C1orf226A1L170 272 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 H0YIV9 168 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 EIF1AYO14602 144 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 KLF4O43474 513 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 NDUFB5O43674 189 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 SSX4O60224 188 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 SOX30O94993 753 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 SYNGR4O95473 234 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ATP1B1P05026 303 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 THBDP07204 575 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 LTA4HP09960 611 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 DRD5P21918 477 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 IL32P24001 234 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 PPICP45877 212 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CLK3P49761 638 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 NUDT6P53370 316 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CLDN15P56746 228 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CORO7P57737 925 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 GPX6P59796 221 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 DR1Q01658 176 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ZNF155Q12901 538 aaPredicted RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 IFT88Q13099 833 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 GTF2H2Q13888 395 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 FRG1Q14331 258 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 GANABQ14697 944 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 LTB4RQ15722 352 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 PFKFB4Q16877 469 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 PRICKLE4Q2TBC4 344 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 TRMT12Q53H54 448 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 SGO1Q5FBB7 561 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 C6orf52Q5T4I8 152 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 LGSNQ5TDP6 509 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 MRM1Q6IN84 353 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 FAM180BQ6P0A1 224 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 GTF2H2CQ6P1K8 395 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 BEND4Q6ZU67 534 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 C22orf34Q6ZV56 151 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 MILR1Q7Z6M3 343 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CMC1Q7Z7K0 106 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ZNF619Q8N2I2 560 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 OR6K3Q8NGY3 331 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 RAB3IL1Q8TBN0 382 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ACTRT1Q8TDG2 376 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 PYROXD1Q8WU10 500 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 SMAP2Q8WU79 429 aaPredicted RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 UBTD2Q8WUN7 234 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CDK15Q96Q40 435 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 GPR22Q99680 433 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 RBBP8Q99708 897 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CPNE1Q99829 537 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 C19orf24Q9BVV8 132 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 FAIM2Q9BWQ8 316 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ZNF717Q9BY31 904 aaPredicted RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 MRPL1Q9BYD6 325 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 DSN1Q9H410 356 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ELOVL6Q9H5J4 265 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 FAIMQ9NVQ4 179 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 MAT2BQ9NZL9 334 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 MED11Q9P086 117 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 CPSF2Q9P2I0 782 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 MCTS1Q9ULC4 181 aaKnown RBP7.09□□□□□ -1.27
HPS4-207ENST00000459918 SLC12A4Q9UP95 1085 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ZNF337Q9Y3M9 751 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 SNX8Q9Y5X2 465 aa7.09□□□□□ -1.27
HPS4-207ENST00000459918 ROS1P08922 2347 aa7.09□□□□□ -1.28
HPS4-207ENST00000459918 ABCA1O95477 2261 aa7.08□□□□□ -1.28
HPS4-207ENST00000459918 LINC01387J3KSC0 135 aa7.08□□□□□ -1.28
HPS4-207ENST00000459918 FOXE1O00358 373 aaPredicted RBP7.08□□□□□ -1.28
HPS4-207ENST00000459918 UGDHO60701 494 aa7.08□□□□□ -1.28
HPS4-207ENST00000459918 BCAS2O75934 225 aaPredicted RBP7.08□□□□□ -1.28
HPS4-207ENST00000459918 SEMA3DO95025 777 aa7.08□□□□□ -1.28
HPS4-207ENST00000459918 CLDN9O95484 217 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms