RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PEX1O43933 1283 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 GDF9O60383 454 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 JRKO75564 520 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 UGT2B17O75795 530 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CYP7B1O75881 506 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SORBS2O94875 1100 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 NUDT14O95848 222 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ONECUT2O95948 504 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 FESP07332 822 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 THBS1P07996 1170 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PABPC4LP0CB38 370 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ANXA8P13928 327 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CD1EP15812 388 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 RHCEP18577 417 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ITIH1P19827 911 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PTPN6P29350 595 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SSTR4P31391 388 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DNAJA1P31689 397 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OTX2P32243 289 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 TRHRP34981 398 aaPredicted RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DLSTP36957 453 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PNLIPRP2P54317 469 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 GABREP78334 506 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SPIBQ01892 262 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 RHAGQ02094 409 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PLCXD2Q0VAA5 305 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 FUT7Q11130 342 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ST3GAL3Q11203 375 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 TARDBPQ13148 414 aaKnown RBP eCLIP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DUSP8Q13202 625 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 MED21Q13503 144 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 NCF4Q15080 339 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ATP6AP1Q15904 470 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SYPL1Q16563 259 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 COLEC12Q5KU26 742 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PRAMEF17Q5VTA0 474 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CDCP2Q5VXM1 449 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 KRT80Q6KB66 452 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PAPD4Q6PIY7 484 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OPN5Q6U736 354 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DEF8Q6ZN54 512 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 NDUFAF7Q7L592 441 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ANKRD37Q7Z713 158 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 AMIGO2Q86SJ2 522 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PIP4P1Q86T03 277 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 STK32CQ86UX6 486 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DND1Q8IYX4 353 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ARHGEF39Q8N4T4 335 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 TMEM156Q8N614 296 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC5A8Q8N695 610 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC15A4Q8N697 577 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 TMCO5AQ8N6Q1 288 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 PACRGLQ8N7B6 248 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CLEC1AQ8NC01 280 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 C17orf47Q8NEP4 570 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OR1N1Q8NGS0 311 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OR2Y1Q8NGV0 311 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OR8K3Q8NH51 312 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 OR5K1Q8NHB7 308 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 C16orf52Q8NHV5 167 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 DNAJC9Q8WXX5 260 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 LRTOMTQ8WZ04 291 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 UCN3Q969E3 161 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC38A4Q969I6 547 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CTHRC1Q96CG8 243 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC35A4Q96G79 324 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 C16orf58Q96GQ5 468 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SDF2Q99470 211 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 RBM4BQ9BQ04 359 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 LMF2Q9BU23 707 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 RBM4Q9BWF3 364 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 POLR2J2Q9GZM3 115 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 POLR2J3Q9H1A7 115 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CHST8Q9H2A9 424 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 GPN2Q9H9Y4 310 aaPredicted RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 APMAPQ9HDC9 416 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLAMF7Q9NQ25 335 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 UBQLN4Q9NRR5 601 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 LANCL2Q9NS86 450 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 GPATCH2Q9NW75 528 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CTSFQ9UBX1 484 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 CNOT11Q9UKZ1 510 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 MKLN1Q9UL63 735 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC35A3Q9Y2D2 325 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 SAMHD1Q9Y3Z3 626 aaKnown RBP5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 REV3LO60673 3130 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 LAMA3Q16787 3333 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
RNU1-88P-201ENST00000459274 TRBV11-1A0A0K0K1C0 115 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 SPAARA0A1B0GVQ0 90 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 VSTM2BA6NLU5 285 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 H0YJX3 145 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 H3BMH7 237 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 hCG_2039718K7EN88 272 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 TNFRSF11BO00300 401 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 SYT5O00445 386 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC30A4O14863 429 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 NDUFB5O43674 189 aa5.42□□□□□ -1.54
RNU1-88P-201ENST00000459274 GFRA3O60609 400 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms