RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CCL21O00585 134 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 ICOSLGO75144 302 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 PDE9AO76083 593 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 ZIC2O95409 532 aaPredicted RBP14.8□□□□□ -0.04
CD28-203ENST00000458610 TGDSO95455 350 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 IGHG3P01860 377 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 IDO1P14902 403 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 EPHA3P29320 983 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 MAGEA5P43359 124 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 MAN2A2P49641 1150 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 LRRC74AQ0VAA2 488 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 TP53BP2Q13625 1128 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 HSP90B2PQ58FF3 399 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 C1QL3Q5VWW1 255 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 NPSR1Q6W5P4 371 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 FJX1Q86VR8 437 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 OR1J4Q8NGS1 313 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 NODALQ96S42 347 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 WDR55Q9H6Y2 383 aaPredicted RBP14.8□□□□□ -0.04
CD28-203ENST00000458610 EQTNQ9NQ60 294 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 FAF1Q9UNN5 650 aaPredicted RBP14.8□□□□□ -0.04
CD28-203ENST00000458610 PCDHGB3Q9Y5G1 929 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 USH1CQ9Y6N9 552 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 BSNQ9UPA5 3926 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 POLEQ07864 2286 aa14.8□□□□□ -0.04
CD28-203ENST00000458610 GOLGA8QA0A0J9YX86 632 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 A0A1B0GVC2 190 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 PRSS51A0A1B0GVH4 220 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 GOLGA8OA6NCC3 632 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 WIPF3A6NGB9 483 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 GOLGA8NF8WBI6 632 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 BCKDKO14874 412 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 NME6O75414 186 aaPredicted RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 CBR3O75828 277 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 WISP2O76076 250 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 NKX2-2O95096 273 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 SVILO95425 2214 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 IL33O95760 270 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 C6orf47O95873 294 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 EFNA1P20827 205 aaPredicted RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 GDF1P27539 372 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 LCN1P31025 176 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 S100A3P33764 101 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 GCKP35557 465 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 TIGD3Q6B0B8 471 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 ACAD11Q709F0 780 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 TRILQ7L0X0 811 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 GLB1L3Q8NCI6 653 aaPredicted RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 FAM57AQ8TBR7 257 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 SFXN5Q8TD22 340 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 SLC9A6Q92581 669 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 SARAFQ96BY9 339 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 FAM120BQ96EK7 910 aaKnown RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 MAELQ96JY0 434 aaKnown RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 ZNF703Q9H7S9 590 aaPredicted RBP14.79□□□□□ -0.04
CD28-203ENST00000458610 AIG1Q9NVV5 245 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 GIN1Q9NXP7 522 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 ABCG2Q9UNQ0 655 aa14.79□□□□□ -0.04
CD28-203ENST00000458610 TRGV5A0A0B4J1U4 118 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 LRRC3CA6NJW4 275 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 AQP7O14520 342 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 UBDO15205 165 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 DIAPH2O60879 1101 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 TRAPPC6AO75865 159 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 SASH3O75995 380 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 LDLRP01130 860 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 TPOP07202 933 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 HSF1Q00613 529 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 C3AR1Q16581 482 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 GSTA3Q16772 222 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 BICRALQ6AI39 1079 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 OR4F3Q6IEY1 312 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 MFSD12Q6NUT3 480 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 ANGPTL8Q6UXH0 198 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 ARFGAP2Q8N6H7 521 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 CKAP2Q8WWK9 683 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 HOXB13Q92826 284 aaPredicted RBP14.78□□□□□ -0.04
CD28-203ENST00000458610 EFHD2Q96C19 240 aaPredicted RBP14.78□□□□□ -0.04
CD28-203ENST00000458610 CHMP6Q96FZ7 201 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 MAGEB18Q96M61 343 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 STACQ99469 402 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 ACTRT3Q9BYD9 372 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 SIRT3Q9NTG7 399 aaPredicted RBP14.78□□□□□ -0.04
CD28-203ENST00000458610 ACAD8Q9UKU7 415 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 C15orf41Q9Y2V0 281 aa14.78□□□□□ -0.04
CD28-203ENST00000458610 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 DUXAA6NLW8 204 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 E9PBE3 544 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 GNB5O14775 395 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 SNPHO15079 494 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 ANKRD28O15084 1053 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 HMGN2P05204 90 aaKnown RBP14.77□□□□□ -0.05
CD28-203ENST00000458610 HPNP05981 417 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 RFPL3SP0C7P2 107 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 CYP4B1P13584 511 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 MAP3K8P41279 467 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 SMSP52788 366 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 TOMM20Q15388 145 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 TMEM211Q6ICI0 200 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms