RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DPPA4Q7L190 304 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 PARS2Q7L3T8 475 aaKnown RBP7.21□□□□□ -1.26
HDAC9-218ENST00000456174 DET1Q7L5Y6 550 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 CLDN22Q8N7P3 220 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 TMEM145Q8NBT3 493 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 WDR20Q8TBZ3 569 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 CREB3L4Q8TEY5 395 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 SCAMP4Q969E2 229 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 CPNE4Q96A23 557 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-218ENST00000456174 TIFAQ96CG3 184 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 DIRAS2Q96HU8 199 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 NSUN5Q96P11 429 aaKnown RBP7.21□□□□□ -1.26
HDAC9-218ENST00000456174 OR2M2Q96R28 347 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 KXD1Q9BQD3 176 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 TMEM43Q9BTV4 400 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 FAM126AQ9BYI3 521 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-218ENST00000456174 PPP1R3EQ9H7J1 279 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 SPASTQ9UBP0 616 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 ZNF222Q9UK12 451 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 SSR3Q9UNL2 185 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 COLQQ9Y215 455 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-218ENST00000456174 NPTNQ9Y639 398 aa7.21□□□□□ -1.26
HDAC9-218ENST00000456174 IGLV3-16A0A075B6K0 115 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 D6RAR5 112 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 LILRB5O75023 590 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 ATP6AP2O75787 350 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 RBBP9O75884 186 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SCELO95171 688 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 BPNT1O95861 308 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 COX5BP10606 129 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SLC2A2P11168 524 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 MMP12P39900 470 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 PCP4P48539 62 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 KCNJ3P48549 501 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SH3BP2P78314 561 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 CRYZQ08257 329 aaKnown RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 GRIN2CQ14957 1233 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 NCF4Q15080 339 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 TSTQ16762 297 aaKnown RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 B3GNTL1Q67FW5 361 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SBSNQ6UWP8 590 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SERPINA13PQ6UXR4 307 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 PGAP1Q75T13 922 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 BTN2A1Q7KYR7 527 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SLC34A3Q8N130 599 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 TMIEQ8NEW7 156 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 OR8D1Q8WZ84 308 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 NEU1Q99519 415 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 RIOK2Q9BVS4 552 aaKnown RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 C1QTNF3Q9BXJ4 246 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 TWSG1Q9GZX9 223 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 MID1IP1Q9NPA3 183 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SEMA4BQ9NPR2 832 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 PRMT8Q9NR22 394 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-218ENST00000456174 DLL4Q9NR61 685 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 LATS2Q9NRM7 1088 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 RAD18Q9NS91 495 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SLC22A11Q9NSA0 550 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 VNN3Q9NY84 501 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 TREM2Q9NZC2 230 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 NUDT4Q9NZJ9 180 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 SEC14L3Q9UDX4 400 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 GPR160Q9UJ42 338 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 UTS2RQ9UKP6 389 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 TICRRQ7Z2Z1 1910 aa7.2□□□□□ -1.26
HDAC9-218ENST00000456174 ANKDD1BA6NHY2 528 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 A6NJY4 79 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 UBE2CO00762 179 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 VPS4BO75351 444 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 GADD45GO95257 159 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 HRGP04196 525 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 FGF4P08620 206 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 ELFN1P0C7U0 828 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 LAMP2P13473 410 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 RHCEP18577 417 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 FPR3P25089 353 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 AKT1P31749 480 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 MAGEA2P43356 314 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 HSPA7P48741 367 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 PXNP49023 591 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-218ENST00000456174 METAP1P53582 386 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 CRISP3P54108 245 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 RAC1P63000 192 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 ECH1Q13011 328 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 LCP2Q13094 533 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 ILKQ13418 452 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
HDAC9-218ENST00000456174 SNAPC1Q16533 368 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 TTLL9Q3SXZ7 439 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 PLA1AQ53H76 456 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 KLHL26Q53HC5 615 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 HENMT1Q5T8I9 393 aaKnown RBP7.19□□□□□ -1.26
HDAC9-218ENST00000456174 DDI2Q5TDH0 399 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 PARM1Q6UWI2 310 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 TECPR1Q7Z6L1 1165 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 SCARB1Q8WTV0 552 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 CHTF18Q8WVB6 975 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 SUSD6Q92537 303 aa7.19□□□□□ -1.26
HDAC9-218ENST00000456174 FGF14Q92915 247 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms