RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 GPATCH1Q9BRR8 931 aaKnown RBP11.81□□□□□ -0.52
TREX1-203ENST00000456089 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
TREX1-203ENST00000456089 METTL7AQ9H8H3 244 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 ACKR4Q9NPB9 350 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 SH3BP4Q9P0V3 963 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 ZNF639Q9UID6 485 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 OR10H1Q9Y4A9 318 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 CCL27Q9Y4X3 112 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
TREX1-203ENST00000456089 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
TREX1-203ENST00000456089 SETD2Q9BYW2 2564 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 FRG2CA6NGY1 282 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 MYO1GB0I1T2 1018 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 NPIPB8E9PQR5 432 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 LSM1O15116 133 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 PDPK1O15530 556 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 AKAP10O43572 662 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 DIAPH2O60879 1101 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ERN1O75460 977 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 REM1O75628 298 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 SERPINE1P05121 402 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 GABRA1P14867 456 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 IL12BP29460 328 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 DNAJA1P31689 397 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 SOX18P35713 384 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 HPCAL1P37235 193 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 CASP3P42574 277 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ETV4P43268 484 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 PSPHP78330 225 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 KIAA0040Q15053 153 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ZNHIT3Q15649 155 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 CEBPEQ15744 281 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 RFTN2Q52LD8 501 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 WIPI1Q5MNZ9 446 aaPredicted RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 TMEM107Q6UX40 140 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 PLXDC2Q6UX71 529 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 SPNS3Q6ZMD2 512 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 Q6ZSR9 355 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 NUP54Q7Z3B4 507 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 R3HCC1LQ7Z5L2 792 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 TMCO6Q96DC7 493 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 OMA1Q96E52 524 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 TSSK3Q96PN8 268 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 TIMP4Q99727 224 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ANGPTL4Q9BY76 406 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 TUBB1Q9H4B7 451 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ANKRA2Q9H9E1 313 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 DDX18Q9NVP1 670 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 DNAJB12Q9NXW2 375 aaKnown RBP11.8□□□□□ -0.52
TREX1-203ENST00000456089 TAS2R7Q9NYW3 318 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 KLRF1Q9NZS2 232 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ZDHHC2Q9UIJ5 367 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 CAMK2AQ9UQM7 478 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
TREX1-203ENST00000456089 ANKRD33BA6NCL7 494 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 PLOD3O60568 738 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 PEX11AO75192 247 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 SDC1P18827 310 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 GRK2P25098 689 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 TACR1P25103 407 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 RPL3P39023 403 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 MC3RP41968 323 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 EMDP50402 254 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 CDK9P50750 372 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 IST1P53990 364 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 MANFP55145 182 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 ABCE1P61221 599 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 MRPS22P82650 360 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 SLC25A35Q3KQZ1 300 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 ANGPTL8Q6UXH0 198 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 YRDCQ86U90 279 aaKnown RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 SLC44A2Q8IWA5 706 aaPredicted RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 ANKRD42Q8N9B4 389 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 FNDC5Q8NAU1 212 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 CLHC1Q8NHS4 586 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.79□□□□□ -0.52
TREX1-203ENST00000456089 TUBGCP3Q96CW5 907 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 DTNBP1Q96EV8 351 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
TREX1-203ENST00000456089 EGLN2Q96KS0 407 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 NODALQ96S42 347 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 UGT2B28Q9BY64 529 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 UBQLN3Q9H347 655 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 GLIPR2Q9H4G4 154 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 FOLH1BQ9HBA9 442 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 QPCTLQ9NXS2 382 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 BAIAP2L1Q9UHR4 511 aa11.79□□□□□ -0.52
TREX1-203ENST00000456089 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms