RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 AVPR2P30518 371 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CCKBRP32239 447 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 HLCSP50747 726 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PRKAG1P54619 331 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CFHR1Q03591 330 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DUSP2Q05923 314 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PUM1Q14671 1186 aaKnown RBP eCLIP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SYPL1Q16563 259 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DECR1Q16698 335 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DUSP7Q16829 419 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM44Q2T9K0 475 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TRIM61Q5EBN2 209 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC25A30Q5SVS4 291 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TYW3Q6IPR3 259 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TCTN3Q6NUS6 607 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 RPL13AP3Q6NVV1 102 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF613Q6PF04 617 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TSSK4Q6SA08 328 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 FRRS1Q6ZNA5 592 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF550Q7Z398 422 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TSEN54Q7Z6J9 526 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SFTPA2Q8IWL1 248 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CACTIN-AS1Q8N1I8 211 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ATG16L2Q8NAA4 619 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF527Q8NB42 609 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 OR10G2Q8NGC3 310 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 OR1L3Q8NH93 324 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 WDR36Q8NI36 951 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CYGBQ8WWM9 190 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 RAB8BQ92930 207 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC38A4Q969I6 547 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 HSPBAP1Q96EW2 488 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ALPK1Q96QP1 1244 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 MBOAT4Q96T53 435 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CTRCQ99895 268 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 FNDC11Q9BVV2 318 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 NMNAT1Q9HAN9 279 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 FOLH1BQ9HBA9 442 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SIDT1Q9NXL6 827 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 UBAP1Q9NZ09 502 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF443Q9Y2A4 671 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM5Q9Y2B1 443 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC35A3Q9Y2D2 325 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TPRKBQ9Y3C4 175 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 V9GYQ6 96 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ADAMTS9Q9P2N4 1935 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 IGHV5-10-1A0A0J9YXX1 117 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PRAMEF27A3QJZ7 478 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 FRG2CA6NGY1 282 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 EFCAB7A8K855 629 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 CDK2AP1O14519 115 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 BCKDKO14874 412 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 KIF1CO43896 1103 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PDGFBP01127 241 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 IGHEP01854 428 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RPLP0P05388 317 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 C8orf89P0DMQ9 161 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 NAGAP17050 411 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 JUNBP17275 347 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 AQP1P29972 269 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PIGAP37287 484 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RBM34P42696 430 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PPM1FP49593 454 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 EMDP50402 254 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 DAPP51397 102 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 EEF1A1P68104 462 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 DAB2P98082 770 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 MYBPC1Q00872 1141 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ZFP36L1Q07352 338 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 NPRL3Q12980 569 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 KCNAB2Q13303 367 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TUBA3CQ13748 450 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 DUSP5Q16690 384 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ENTPD8Q5MY95 495 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF770Q6IQ21 691 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 FAM111BQ6SJ93 734 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TBPL2Q6SJ96 375 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PRSS41Q7RTY9 318 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SZRD1Q7Z422 152 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF615Q8N8J6 731 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 AGBL5Q8NDL9 886 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TSPAN14Q8NG11 270 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 IFI44Q8TCB0 444 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 KAT2AQ92830 837 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 UCN3Q969E3 161 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 COL26A1Q96A83 441 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 NACC2Q96BF6 587 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PEX11GQ96HA9 241 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 MPP4Q96JB8 637 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 GFM1Q96RP9 751 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 CDC6Q99741 560 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 BCL7BQ9BQE9 202 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TEX12Q9BXU0 123 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TRIM2Q9C040 744 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SPRTNQ9H040 489 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ING2Q9H160 280 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 EXOSC3Q9NQT5 275 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms