RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SLC38A5Q8WUX1 472 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 SLC9A6Q92581 669 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 CDS1Q92903 461 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 RAB8BQ92930 207 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
TRAF4-206ENST00000454852 SDF2Q99470 211 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 ZNF350Q9GZX5 532 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 LHPPQ9H008 270 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 MUC13Q9H3R2 512 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 ADA2Q9NZK5 511 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 CALML5Q9NZT1 146 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 SUCOQ9UBS9 1254 aaKnown RBP10.4□□□□□ -0.74
TRAF4-206ENST00000454852 MRTO4Q9UKD2 239 aaKnown RBP10.4□□□□□ -0.74
TRAF4-206ENST00000454852 CBLCQ9ULV8 474 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 KCNE3Q9Y6H6 103 aa10.4□□□□□ -0.74
TRAF4-206ENST00000454852 A0A0G2JPF8 293 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 HNRNPCL2B2RXH8 293 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 HNRNPCL3B7ZW38 293 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TAF4O00268 1085 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TSPAN2O60636 221 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ABCB7O75027 752 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 NME6O75414 186 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 KCNK2O95069 426 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 IL33O95760 270 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 HNRNPCL4P0DMR1 293 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 PGM1P36871 562 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 CRISP3P54108 245 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 PNLIPRP2P54317 469 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 PSMD4P55036 377 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 NRG3P56975 720 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 MRPS22P82650 360 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 CDK6Q00534 326 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 CYP51A1Q16850 503 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 CRB2Q5IJ48 1285 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 DCST2Q5T1A1 773 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ATP1A1-AS1Q5TC04 95 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 BROXQ5VW32 411 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TCTN3Q6NUS6 607 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 WDR53Q7Z5U6 358 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 SLC44A2Q8IWA5 706 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ULK2Q8IYT8 1036 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 MICU2Q8IYU8 434 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 GALNT16Q8N428 558 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 AMER2Q8N7J2 671 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 BCORP1Q8N888 145 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 HIPK4Q8NE63 616 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 SLC22A8Q8TCC7 542 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 RNF138Q8WVD3 245 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 XAGE5Q8WWM1 108 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 PIK3R3Q92569 461 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 JADE3Q92613 823 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ASB9Q96DX5 294 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 GAL3ST4Q96RP7 486 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 KCTD14Q9BQ13 255 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 YIPF4Q9BSR8 244 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 G6PC3Q9BUM1 346 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 TRIM45Q9H8W5 580 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 YARS2Q9Y2Z4 477 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 ACACAQ13085 2346 aa10.39□□□□□ -0.75
TRAF4-206ENST00000454852 CPAMD8Q8IZJ3 1885 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 GXYLT2A0PJZ3 443 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 OR6C70A6NIJ9 312 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 ARGFXA6NJG6 315 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 NPIPB9F8W1W9 429 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 STX11O75558 287 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 PGM3O95394 542 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 NGFRP08138 427 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 FBXO45P0C2W1 286 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 ETS2P15036 469 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 GGT1P19440 569 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 ABCD3P28288 659 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 NR0B1P51843 470 aaKnown RBP10.38□□□□□ -0.75
TRAF4-206ENST00000454852 CASP9P55211 416 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 FOXK2Q01167 660 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 TRAP1Q12931 704 aaKnown RBP10.38□□□□□ -0.75
TRAF4-206ENST00000454852 SCARB2Q14108 478 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 SYPL1Q16563 259 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 DECR1Q16698 335 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 MEP1AQ16819 746 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 INTS11Q5TA45 600 aaKnown RBP10.38□□□□□ -0.75
TRAF4-206ENST00000454852 TYW3Q6IPR3 259 aaKnown RBP10.38□□□□□ -0.75
TRAF4-206ENST00000454852 REEP3Q6NUK4 255 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 TMEM81Q6P7N7 255 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 FRRS1Q6ZNA5 592 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 C16orf62Q7Z3J2 963 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 GPALPP1Q8IXQ4 340 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 OR4N2Q8NGD1 307 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 BBS10Q8TAM1 723 aa10.38□□□□□ -0.75
TRAF4-206ENST00000454852 FBXO30Q8TB52 745 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms