RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SEMA3DO95025 777 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CLDN9O95484 217 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ESRRBO95718 433 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PDYNP01213 254 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ATP1B1P05026 303 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RHOXF2BP0C7M4 288 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CT45A8P0DMV1 189 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CT45A9P0DMV2 189 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 HK1P19367 917 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PTNP21246 168 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SRD5A2P31213 254 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GALNSP34059 522 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EVI2BP34910 448 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SPRP35270 261 aaPredicted RBP5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CDKN1AP38936 164 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MC3RP41968 323 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SERPINB8P50452 374 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GAS1P54826 345 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PLTPP55058 493 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RPP38P78345 283 aaKnown RBP5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DMTNQ08495 405 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAPQ12884 760 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CALCOCO2Q13137 446 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PRSS53Q2L4Q9 553 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CT45A2Q5DJT8 189 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF628Q5EBL2 1059 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 LIPJQ5W064 366 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SLC30A6Q6NXT4 461 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 AAGABQ6PD74 315 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SCIMPQ6UWF3 145 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZDHHC24Q6UX98 284 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SLC44A2Q8IWA5 706 aaPredicted RBP5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C17orf53Q8N3J3 647 aaPredicted RBP5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF610Q8N9Z0 462 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 L3MBTL4Q8NA19 623 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GATSQ8NAP1 163 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C17orf47Q8NEP4 570 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR2M3Q8NG83 312 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR7G2Q8NG99 324 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR7G1Q8NGA0 311 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR4F6Q8NGB9 312 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FBXO25Q8TCJ0 367 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 HTRA1Q92743 480 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PIGTQ969N2 578 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ATP6V1E2Q96A05 226 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 REPS1Q96D71 796 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 VSTM2LQ96N03 204 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZFP3Q96NJ6 502 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 BTBD9Q96Q07 612 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 KCNA7Q96RP8 456 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SERPINI1Q99574 410 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NAPGQ99747 312 aaPredicted RBP5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GSX2Q9BZM3 304 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PIGMQ9H3S5 423 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DSN1Q9H410 356 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ELOVL6Q9H5J4 265 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C12orf49Q9H741 205 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FOLH1BQ9HBA9 442 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EQTNQ9NQ60 294 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF226Q9NYT6 803 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MED11Q9P086 117 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SENP1Q9P0U3 644 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NDRG3Q9UGV2 375 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF639Q9UID6 485 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 UTS2RQ9UKP6 389 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PYCARDQ9ULZ3 195 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DLGAP4Q9Y2H0 992 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ACOT9Q9Y305 439 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IKBKGQ9Y6K9 419 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR2M5A3KFT3 312 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR6C70A6NIJ9 312 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C16orf97H3BN30 126 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FOXE1O00358 373 aaPredicted RBP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ACOX3O15254 700 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PCDH7O60245 1069 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TSPAN2O60636 221 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CBR3O75828 277 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR4F21O95013 312 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CGAP01215 116 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SOD3P08294 240 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RPS17P08708 135 aaKnown RBP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PEPDP12955 493 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CSNK2A2P19784 350 aaPredicted RBP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SHC1P29353 583 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CRABP2P29373 138 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 STX2P32856 288 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ACVR1BP36896 505 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MAGEA4P43358 317 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EIF1AXP47813 144 aaKnown RBP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IFT88Q13099 833 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SF3B4Q15427 424 aaKnown RBP eCLIP5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAM83EQ2M2I3 478 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GRTP1Q5TC63 336 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ADAM5Q6NVV9 412 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TMEM107Q6UX40 140 aa5.38□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C20orf204Q6ZNR8 217 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms