RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 AMDHD1Q96NU7 426 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 SH3GL2Q99962 352 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 TRMOQ9BU70 441 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 GATA5Q9BWX5 397 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-208ENST00000452047 TUBB1Q9H4B7 451 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 FBXL2Q9UKC9 423 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 C19orf53Q9UNZ5 99 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-208ENST00000452047 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 MBD3L4A6NDZ8 208 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 MBD3L3A6NE82 208 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 MBD3L5A6NJ08 208 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 C17orf51A8MQB3 221 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 DVL2O14641 736 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 AZIN1O14977 448 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 TRIM13O60858 407 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 IFI6P09912 130 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 CPN1P15169 458 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 BMP5P22003 454 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 IL12BP29460 328 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 NTSP30990 170 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ZNF136P52737 540 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 GFRA1P56159 465 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ZNF155Q12901 538 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.593e-7■■■■■ 27.6
CPSF4-208ENST00000452047 FBXL19-AS1Q494R0 122 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 KANK2Q63ZY3 851 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ADGRE4PQ86SQ3 457 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 CDH24Q86UP0 819 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 RIBC1Q8N443 379 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 MBD3L2Q8NHZ7 208 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 EFHD2Q96C19 240 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ELP4Q96EB1 424 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ZNF764Q96H86 408 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 CCT7Q99832 543 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ZNF559Q9BR84 538 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 LRTM1Q9HBL6 345 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 C1orf109Q9NX04 203 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 ZNF629Q9UEG4 869 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-208ENST00000452047 LGALS13Q9UHV8 139 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 DNAJC15Q9Y5T4 150 aa11.34□□□□□ -0.59
CPSF4-208ENST00000452047 TLDC2A0PJX2 215 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SLC28A1O00337 649 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SYT5O00445 386 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 RGS14O43566 566 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SEC22BO75396 215 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 IL2RAP01589 272 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 CHRNGP07510 517 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 NEFHP12036 1026 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 CYP4B1P13584 511 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SDC1P18827 310 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 POU3F2P20265 443 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-208ENST00000452047 GRK2P25098 689 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 ALDH3A1P30838 453 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SRD5A2P31213 254 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 EVI2BP34910 448 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 KRT20P35900 424 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 ASCL1P50553 236 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 MYBPHQ13203 477 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 CYP27C1Q4G0S4 372 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 ZNF385BQ569K4 471 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 ARSKQ6UWY0 536 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 OR14L1PQ8NHC6 308 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 ZPLD1Q8TCW7 415 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 AENQ8WTP8 325 aaKnown RBP11.33□□□□□ -0.6
CPSF4-208ENST00000452047 FAM111AQ96PZ2 611 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 G6PC3Q9BUM1 346 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 MECRQ9BV79 373 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 CALHM2Q9HA72 323 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 DDX18Q9NVP1 670 aaKnown RBP11.33□□□□□ -0.6
CPSF4-208ENST00000452047 TAS2R10Q9NYW0 307 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 SLC17A7Q9P2U7 560 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 MRPS18CQ9Y3D5 142 aaKnown RBP11.33□□□□□ -0.6
CPSF4-208ENST00000452047 OR10H1Q9Y4A9 318 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 MED12LQ86YW9 2145 aa11.33□□□□□ -0.6
CPSF4-208ENST00000452047 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 TMEM233B4DJY2 109 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 LSM1O15116 133 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FADS1O60427 444 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 ZIC3O60481 467 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 NPHS1O60500 1241 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 TBX19O60806 448 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FGF4P08620 206 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 GCKP35557 465 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FRKP42685 505 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 LHX2P50458 406 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 RPL38P63173 70 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 GAB1Q13480 694 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 SNTB1Q13884 538 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 PDE7AQ13946 482 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 RCAN2Q14206 197 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 TESK1Q15569 626 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 UGT3A2Q3SY77 523 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 RFTN2Q52LD8 501 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 SH2D4BQ5SQS7 431 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 CES4AQ5XG92 561 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms