RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 ZNF764Q96H86 408 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 SSU72Q9NP77 194 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 SERHLQ9NQF3 203 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 DDX18Q9NVP1 670 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 COQ3Q9NZJ6 369 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 KLRF1Q9NZS2 232 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 FLRT3Q9NZU0 649 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 SH3BP4Q9P0V3 963 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 MAPRE3Q9UPY8 281 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 TMED5Q9Y3A6 229 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 NINQ8N4C6 2090 aa11.26□□□□□ -0.61
CSNK1E-211ENST00000451964 PKDREJQ9NTG1 2253 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 A0A0G2JNJ9 132 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 PDPK1O15530 556 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 ABCB7O75027 752 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 COQ9O75208 318 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 SKAP2O75563 359 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 TOXO94900 526 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 CYP4B1P13584 511 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 BMP7P18075 431 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 ELAVL4P26378 380 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 CHRNB4P30926 498 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 FRKP42685 505 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 PNLIPRP2P54317 469 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 TFF3Q07654 80 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 HSPB3Q12988 150 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 TOMM20Q15388 145 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 C6orf136Q5SQH8 315 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 DCST1Q5T197 706 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 C1orf185Q5T7R7 199 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 OR5M10Q6IEU7 315 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 FAM83FQ8NEG4 500 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 OR10Q1Q8NGQ4 319 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 ASB5Q8WWX0 329 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 PPP3R2Q96LZ3 170 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 LMF2Q9BU23 707 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 UGT2B28Q9BY64 529 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 C20orf27Q9GZN8 174 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 Q9UFV3 132 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 OR10H1Q9Y4A9 318 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 PCDHGB3Q9Y5G1 929 aa11.25□□□□□ -0.61
CSNK1E-211ENST00000451964 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 GXYLT2A0PJZ3 443 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 BIRC5O15392 142 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 FADS1O60427 444 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 CBR3O75828 277 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 IGKV1D-16P01601 117 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 SERPINE1P05121 402 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 TUBBP07437 444 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 HOXD4P09016 255 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 IFI6P09912 130 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 COX6B1P14854 86 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 IL12BP29460 328 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 MAP3K8P41279 467 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 WNT3P56703 355 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 PSPHP78330 225 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 EFR3AQ14156 821 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 PTGR1Q14914 329 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 CHI3L2Q15782 390 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 CYP27C1Q4G0S4 372 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 IL23RQ5VWK5 629 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 PLCZ1Q86YW0 608 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 OR7A2PQ8NGA2 310 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 HOXB13Q92826 284 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 GIMAP5Q96F15 307 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 C1orf50Q9BV19 199 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 RTN4RQ9BZR6 473 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 TRIM8Q9BZR9 551 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 PRDM14Q9GZV8 571 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 NTMQ9P121 344 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 ATP6V1HQ9UI12 483 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 FBXL2Q9UKC9 423 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 CBLCQ9ULV8 474 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 WIF1Q9Y5W5 379 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 MYO9AB2RTY4 2548 aa11.24□□□□□ -0.61
CSNK1E-211ENST00000451964 CREBBPQ92793 2442 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 TM9SF1O15321 606 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 HSPA4LO95757 839 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 LAMP1P11279 417 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 PRPS2P11908 318 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 GABRA1P14867 456 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 GABRA3P34903 492 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 GPC1P35052 558 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 KRT20P35900 424 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 ASMTP46597 345 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 PRKAG1P54619 331 aa11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 MANFP55145 182 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-211ENST00000451964 ABCE1P61221 599 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms