RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TLR8Q9NR97 1041 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 SEMA3GQ9NS98 782 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ZNF275Q9NSD4 429 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 CORO2BQ9UQ03 480 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 PCNTO95613 3336 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 NUP214P35658 2090 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 CD8B2A6NJW9 211 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SMAD6O43541 496 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 TLX2O43763 284 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 PCDH7O60245 1069 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SEMA7AO75326 666 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 AQP8O94778 261 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SPDEFO95238 335 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PDYNP01213 254 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SRPRAP08240 638 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 RNF224P0DH78 156 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 CD8BP10966 210 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NPR2P20594 1047 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PAICSP22234 425 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 AKAP5P24588 427 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SOX18P35713 384 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PGDP52209 483 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 WNT3P56703 355 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 SNTB2Q13425 540 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 RBMS2Q15434 407 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 ZBTB6Q15916 424 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 CPSF6Q16630 551 aaKnown RBP eCLIP8.12□□□□□ -1.11
LSM5-208ENST00000450169 XKR6Q5GH73 641 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 GCNT6Q5T4J0 391 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PRAMEF18Q5VWM3 479 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SLC22A10Q63ZE4 541 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 HBMQ6B0K9 141 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 DHRS7BQ6IAN0 325 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 METTL7BQ6UX53 244 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NR2C2APQ86WQ0 139 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SERPINA12Q8IW75 414 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 RELL2Q8NC24 303 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 ARRDC2Q8TBH0 407 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PHOSPHO1Q8TCT1 267 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 KAT2AQ92830 837 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 TADA1Q96BN2 335 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ZDHHC12Q96GR4 267 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 EGFL8Q99944 293 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 C7orf50Q9BRJ6 194 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 TCEAL7Q9BRU2 100 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NTMT1Q9BV86 223 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 CPEB1Q9BZB8 566 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 C8orf33Q9H7E9 229 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 NLE1Q9NVX2 485 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 FAM120CQ9NX05 1096 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 TVP23BQ9NYZ1 205 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FLRT1Q9NZU1 646 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NFKBIL1Q9UBC1 381 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 PLEKHM1Q9Y4G2 1056 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 LOC285556D6RIA3 1793 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 A0A1B0GUH1 482 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ZNF729A6NN14 1252 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 C2orf74A8MZ97 194 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 GJB3O75712 270 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 HIST1H2ABP04908 130 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 KLK3P07288 261 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 ANKRD34CP0C6C1 535 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 HSD3B1P14060 373 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 COX7A2P14406 83 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 CBR1P16152 277 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FPR3P25089 353 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SIM1P81133 766 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 RELQ04864 619 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 MELKQ14680 651 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FKBP1CQ5VVH2 108 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ELP2Q6IA86 826 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FUT10Q6P4F1 479 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NCEH1Q6PIU2 408 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 HIST3H2AQ7L7L0 130 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 NAGSQ8N159 534 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 REPS2Q8NFH8 660 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 GNPDA2Q8TDQ7 276 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 SELENOMQ8WWX9 145 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 HIST1H2ACQ93077 130 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ORAI1Q96D31 301 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 LRR1Q96L50 414 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FCRL2Q96LA5 508 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 APOLD1Q96LR9 279 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 IFT27Q9BW83 186 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 POLE3Q9NRF9 147 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 WWOXQ9NZC7 414 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 GJD2Q9UKL4 321 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 ZNF214Q9UL59 606 aaPredicted RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 FLVCR2Q9UPI3 526 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 FNDC3AQ9Y2H6 1198 aaKnown RBP8.12□□□□□ -1.11
LSM5-208ENST00000450169 ENPP4Q9Y6X5 453 aa8.12□□□□□ -1.11
LSM5-208ENST00000450169 PDCD11Q14690 1871 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms