RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MLIPQ5VWP3 458 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ZC3H14Q6PJT7 736 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CALHM3Q86XJ0 350 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ZMYND19Q96E35 227 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CPNE2Q96FN4 548 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 C16orf58Q96GQ5 468 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ARPC5LQ9BPX5 153 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 BHLHE41Q9C0J9 482 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 NLGN3Q9NZ94 848 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 EXO1Q9UQ84 846 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 A3GALT2U3KPV4 340 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 DNAH12Q6ZR08 3092 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 NTN1O95631 604 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 HMGN2P05204 90 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 GSTM3P21266 225 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 VAMP1P23763 118 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ELAVL4P26378 380 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ERVFC1P60507 584 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 TRAM2Q15035 370 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 GRK1Q15835 563 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 PLK5Q496M5 336 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CCNJQ5T5M9 372 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 POGLUT1Q8NBL1 392 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 OR2T33Q8NG76 320 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 OR5AR1Q8NGP9 310 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 SEC22CQ9BRL7 303 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 GPR174Q9BXC1 333 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 TREM1Q9NP99 234 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 BTAF1O14981 1849 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 LAMB2P55268 1798 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 A0A1W2PPL8 197 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ANXA2P2A6NMY6 339 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 EFCAB14O75071 495 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 OR6A2O95222 327 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 MT-ND5P03915 603 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 HMGN1P05114 100 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ANXA2P07355 339 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 GALTP07902 379 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 F8A1P23610 371 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CCND3P30281 292 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 FKBP1BP68106 108 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF79Q15937 498 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 KHDRBS2Q5VWX1 349 aaKnown RBP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 SPRYD7Q5W111 196 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF627Q7L945 461 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 GALNTL5Q7Z4T8 443 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 SIAH3Q8IW03 269 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CXorf40AQ8TE69 158 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.7□□□□□ -0.54
UBE3B-204ENST00000449510 LMAN2LQ9H0V9 348 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 ASAH2Q9NR71 780 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 KLHL21Q9UJP4 597 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 WDR45Q9Y484 360 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 FOCADQ5VW36 1801 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TRBV2A0A0J9YWF9 115 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 C13orf42A0A1B0GVH6 325 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 QSOX1O00391 747 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RNASET2O00584 256 aaKnown RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RAB3BP20337 219 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 SLC1A3P43003 542 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 VEGFCP49767 419 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 CHRNEQ04844 493 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 ASAH1Q13510 395 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PLEKHS1Q5SXH7 462 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 AFMIDQ63HM1 303 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 FIGNL1Q6PIW4 674 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 AMZ2Q86W34 360 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 SLC44A3Q8N4M1 653 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 NANOGP1Q8N7R0 232 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 GLYATL1Q969I3 302 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 SGTBQ96EQ0 304 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 C1QTNF3Q9BXJ4 246 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PIGUQ9H490 435 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TRIM64A6NGJ6 449 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 OR10H2O60403 315 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 EOMESO95936 686 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TCRBP04435 133 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PTHLHP12272 177 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 MAGEA11P43364 429 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TCTN3Q6NUS6 607 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 C3P1Q6ZMU1 363 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RTL4Q6ZR62 310 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TSEN15Q8WW01 171 aaKnown RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 SOCS4Q8WXH5 440 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 UPRTQ96BW1 309 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 EXO5Q9H790 373 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 NPAP1Q9NZP6 1156 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RP2O75695 350 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PTH2RP49190 550 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms