RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SPRYD4Q8WW59 207 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 FN3KQ9H479 309 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 C11orf49Q9H6J7 331 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 ASB8Q9H765 288 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 ELAC1Q9H777 363 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 GSN-AS1Q9NRJ2 163 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 CA10Q9NS85 328 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 MRPL15Q9P015 296 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 GULP1Q9UBP9 304 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 ZNF69Q9UC07 566 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 SEC14L3Q9UDX4 400 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 PIKFYVEQ9Y2I7 2098 aa8.88□□□□□ -0.99
SYNPO2-204ENST00000448416 FXYD6-FXYD2A0A087WZ82 144 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PRAMEF4O60810 478 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 NDUFS6O75380 124 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 IFNA4P05014 189 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SHC1P29353 583 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CENPAP49450 140 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 IRF8Q02556 426 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CXCL9Q07325 125 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SERTAD2Q14140 314 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CHRNA6Q15825 494 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SLC5A12Q1EHB4 618 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PRAMEF9Q5VWM5 478 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 LRRN1Q6UXK5 716 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 IKBIPQ70UQ0 350 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CFAP52Q8N1V2 620 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 RELL2Q8NC24 303 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CAMKVQ8NCB2 501 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 OR4F15Q8NGB8 312 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 OR6S1Q8NH40 331 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 FAIM2Q9BWQ8 316 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 FXYD6Q9H0Q3 95 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PDFQ9HBH1 243 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 MRPS18AQ9NVS2 196 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CASTOR2A6NHX0 329 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 RRN3P2A6NIE6 340 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 DISC1C4P0D8 188 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 LRRN3E7EW58 273 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 RGS9O75916 674 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SPDEFO95238 335 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ACADLP28330 430 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 KCNJ3P48549 501 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 OR10A3P58181 314 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PITPNAQ00169 270 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 MINDY4Q4G0A6 757 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TIGD5Q53EQ6 642 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CCDC157Q569K6 752 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PAN3Q58A45 887 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 GPRC6AQ5T6X5 926 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ARMC12Q5T9G4 340 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TCTN3Q6NUS6 607 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SLC16A13Q7RTY0 426 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TMEM17Q86X19 198 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 GPR156Q8NFN8 814 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 BPIFCQ8NFQ6 507 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TMEM40Q8WWA1 233 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CMSS1Q9BQ75 279 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TMPRSS13Q9BYE2 586 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 LRRN3Q9H3W5 708 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 GPN3Q9UHW5 284 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 FBXW2Q9UKT8 454 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SLC9B1P1A6NJY1 282 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 RNASET2O00584 256 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 PGRMC2O15173 223 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 OLFM2O95897 454 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 EPHX1P07099 455 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SIM1P81133 766 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TNFRSF17Q02223 184 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ZNF528Q3MIS6 628 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ELP2Q6IA86 826 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SFXN4Q6P4A7 337 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 UBE2R2Q712K3 238 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 CMIPQ8IY22 773 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 GPC2Q8N158 579 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ZNF485Q8NCK3 441 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 SLC7A13Q8TCU3 470 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 TCEAL3Q969E4 200 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 WDR89Q96FK6 387 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ART5Q96L15 291 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 ACBD6Q9BR61 282 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 WRAP53Q9BUR4 548 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 IL17CQ9P0M4 197 aa8.87□□□□□ -0.99
SYNPO2-204ENST00000448416 A0A0B4J203 849 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 MEIS3P2A8K0S8 358 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 GALR3O60755 368 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 UBL3O95164 117 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 ARAFP10398 606 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 AOAHP28039 575 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 MMP15P51511 669 aa8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 PCBP3P57721 371 aaKnown RBP8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 EEF1A2Q05639 463 aaKnown RBP8.86□□□□□ -0.99
SYNPO2-204ENST00000448416 TWF1Q12792 350 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms