RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SYT3Q9BQG1 590 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 NELFAQ9H3P2 528 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 THSD1Q9NS62 852 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ANKMY1Q9P2S6 941 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KCNS2Q9ULS6 477 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 FEZF1A0PJY2 475 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 UBFD1O14562 309 aaKnown RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KCNJ13O60928 360 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 NDUFB2O95178 105 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SPDEFO95238 335 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CFIP05156 583 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CDK1P06493 297 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PTPN6P29350 595 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PBX2P40425 430 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 MRPS10P82664 201 aaKnown RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 EMX1Q04741 257 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ELAVL3Q14576 367 aaKnown RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 LEG1Q6P5S2 330 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 LARP4Q71RC2 724 aaKnown RBP eCLIP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SLC7A5P1Q8MH63 180 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 OR5D16Q8NGK9 328 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CD200R1Q8TD46 325 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 HAVCR2Q8TDQ0 301 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 C16orf70Q9BSU1 422 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 MFFQ9GZY8 342 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 NT5DC2Q9H857 520 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 GORASP2Q9H8Y8 452 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CNOT2Q9NZN8 540 aaKnown RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 GJD2Q9UKL4 321 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ATE1O95260 518 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SLC16A8O95907 504 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 AQP2P41181 271 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SOX3P41225 446 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KCNJ5P48544 419 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 POU3F4P49335 361 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 FOXA1P55317 472 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ATAD3CQ5T2N8 411 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KCTD20Q7Z5Y7 419 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 COMTD1Q86VU5 262 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KLHDC8AQ8IYD2 350 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 C7orf61Q8IZ16 206 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 B3GNT7Q8NFL0 401 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 GPR150Q8NGU9 434 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SNAPC3Q92966 411 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 NT5C3BQ969T7 300 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 BMFQ96LC9 184 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CNTNAP3BQ96NU0 1288 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CDC6Q99741 560 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SGIP1Q9BQI5 828 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 BOCQ9BWV1 1114 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ACTRT3Q9BYD9 372 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF442Q9H7R0 627 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SYNPO2LQ9H987 977 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ASF1BQ9NVP2 202 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 IL20RAQ9UHF4 553 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 SLCO3A1Q9UIG8 710 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ICKQ9UPZ9 632 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 AP1M2Q9Y6Q5 423 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 A0A0A6YYH2 397 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 A6NJ64 397 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ACOT7O00154 380 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KIAA0355O15063 1070 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 FGF18O76093 207 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 RAB3DO95716 219 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 IFNA4P05014 189 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 HEXBP07686 556 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PRSS56P0CW18 603 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ITGAMP11215 1152 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PRKACBP22694 351 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CRHBPP24387 322 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 EVI2BP34910 448 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 RGS6P49758 472 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ZXDBP98169 803 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 PPA1Q15181 289 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 TBCEQ15813 527 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 FAM69AQ5T7M9 428 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 IER5LQ5T953 404 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 MAMDC2Q7Z304 686 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 METTL27Q8N6F8 245 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 CSNK1A1LQ8N752 337 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 OR7G3Q8NG95 312 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 KLHL15Q96M94 604 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 LMF1Q96S06 567 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 THAP7Q9BT49 309 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-204ENST00000448183 GON7Q9BXV9 100 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 TLR9Q9NR96 1032 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF175Q9Y473 711 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 MYH11P35749 1972 aa7.38□□□□□ -1.23
NEDD9-204ENST00000448183 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 M0R3H8 397 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IL33O95760 270 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SNAI1O95863 264 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SYPP08247 313 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 RAB28P51157 221 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CTXN1P60606 82 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms