RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KPNA2P52292 529 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PDX1P52945 283 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MAPK12P53778 367 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PEX3P56589 373 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SNRPFP62306 86 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 POLR2LP62875 67 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MAT1AQ00266 395 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 BNIP2Q12982 314 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 NME3Q13232 169 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 NRF1Q16656 503 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUSP7Q16829 419 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LRIT3Q3SXY7 679 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 FGD3Q5JSP0 725 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SAMD4BQ5PRF9 694 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ELFN2Q5R3F8 820 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LRRC38Q5VT99 294 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MOXD1Q6UVY6 613 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 C9orf139Q6ZV77 190 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RFPL4BQ6ZWI9 263 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 NFE4Q86UQ8 179 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 NUDT13Q86X67 352 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PLD3Q8IV08 490 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RCOR2Q8IZ40 523 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR8H3Q8N146 312 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCDC185Q8N715 623 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LINC00469Q8N7U9 141 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF611Q8N823 705 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANKFN1Q8N957 763 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 C9orf106Q8NAJ2 232 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 FBXO36Q8NEA4 188 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 DMBX1Q8NFW5 382 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR13J1Q8NGT2 312 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 FGFBP3Q8TAT2 258 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PHF10Q8WUB8 498 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CYGBQ8WWM9 190 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PIK3R3Q92569 461 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUS3LQ96G46 650 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF560Q96MR9 790 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MBOAT7Q96N66 472 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RDH12Q96NR8 316 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MTG1Q9BT17 334 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMEM121Q9BTD3 319 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MRPL9Q9BYD2 267 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 VPS33BQ9H267 617 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 FZD8Q9H461 694 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SYTL2Q9HCH5 934 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TM9SF3Q9HD45 589 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SMPD3Q9NY59 655 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MTRRQ9UBK8 725 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF112Q9UJU3 913 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RNF150Q9ULK6 438 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 AGTPBP1Q9UPW5 1226 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANKRD31Q8N7Z5 1873 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LTBP4Q8N2S1 1624 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CNTNAP1P78357 1384 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRAV34A0A0B4J273 112 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 TCRBV9S1A1TA0A576 114 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM170AA1A519 330 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 KBTBD13C9JR72 458 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 PI4K2BG5E9Z4 385 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 H0Y626 953 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 H3BMM5 538 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 AIM2O14862 343 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZBTB5O15062 677 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 DCXO43602 365 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 BUB3O43684 328 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 PRKNO60260 465 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 DFNA5O60443 496 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 UPK1BO75841 260 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 GABARAPO95166 117 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 HPRP00739 348 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 IFNA16P05015 189 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 CALB1P05937 261 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 UGT2B4P06133 528 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 F7P08709 466 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 MBL2P11226 248 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 FGF5P12034 268 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 IL7P13232 177 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 AMD1P17707 334 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 CD22P20273 847 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 MSH3P20585 1137 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 FASP25445 335 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 PSMA3P25788 255 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 PIK3R1P27986 724 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 HOXC13P31276 330 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 DDOSTP39656 456 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 CBX5P45973 191 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 CAPZA1P52907 286 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 GAS1P54826 345 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 RAB25P57735 213 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 B2MP61769 119 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 CDKL1Q00532 357 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 ENPEPQ07075 957 aa4.05□□□□□ -1.76
HMGB1P16-201ENST00000447155 MZT1Q08AG7 82 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms