RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 GDF3Q9NR23 364 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF446Q9NWS9 450 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 COMMD8Q9NX08 183 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 AATFQ9NY61 560 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 IFNKQ9P0W0 207 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 MYH2Q9UKX2 1941 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 SNX5Q9Y5X3 404 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 AUP1Q9Y679 476 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 BAZ2AQ9UIF9 1905 aaKnown RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 SYNRGQ9UMZ2 1314 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 TLR4O00206 839 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 POLR2DO15514 142 aaKnown RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZSCAN12O43309 604 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 GMNNO75496 209 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 ANXA9O76027 345 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 PLEKHA8P1O95397 391 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 RENP00797 406 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 IGHG3P01860 377 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 TPM1P09493 284 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC159P0C7I6 412 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 TPBGLP0DKB5 382 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 FCARP24071 287 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 STIP1P31948 543 aaKnown RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC1A6P48664 564 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 TKTL1P51854 596 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 LIMK2P53671 638 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 KCNK10P57789 538 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCZ1BP86790 482 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCZ1P86791 482 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 P2RY14Q15391 338 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 FILIP1LQ4L180 1135 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 GALNT17Q6IS24 598 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 EMBQ6PCB8 327 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 REG3GQ6UW15 175 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC25A42Q86VD7 318 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 VSTM4Q8IW00 320 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 PARP8Q8N3A8 854 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 FGFRL1Q8N441 504 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 MSANTD4Q8NCY6 345 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 ANKRD20A12PQ8NF67 263 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR4F5Q8NH21 305 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC12Q8WUD4 166 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 ANKRD27Q96NW4 1050 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 HSD17B14Q9BPX1 270 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 LZTS2Q9BRK4 669 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 DCLRE1BQ9H816 532 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 VPS54Q9P1Q0 977 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 FBXO7Q9Y3I1 522 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 TAF1LQ8IZX4 1826 aa3.56□□□□□ -1.84
HMGB3P6-201ENST00000444896 COL4A1P02462 1669 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 TNRC6CQ9HCJ0 1690 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 COL2A1P02458 1487 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 PHLPP2Q6ZVD8 1323 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 A0A087WWV3 80 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 TEX48A0A1B0GUV7 120 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 BCLAF3A2AJT9 711 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 YJEFN3A6XGL0 299 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 TMCO5BA8MYB1 307 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 LAD1O00515 517 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 KERAO60938 352 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 VENTXO95231 258 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 PNPP00491 289 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 FOSL2P15408 326 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 LONP1P36776 959 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 SPAG1Q07617 926 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 ORC2Q13416 577 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 MPPE1Q53F39 396 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 Q6ZRG5 221 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 PDCL2Q8N4E4 241 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR6M1Q8NGM8 313 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR4Q3Q8NH05 313 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC47Q96A33 483 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLCO4A1Q96BD0 722 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 GPR137Q96N19 417 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 RUNDC3BQ96NL0 473 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 ATP6V0BQ99437 205 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 FAM213AQ9BRX8 229 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 FUNDC2Q9BWH2 189 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC25A19Q9HC21 320 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 PIGVQ9NUD9 493 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 ACOXLQ9NUZ1 547 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 RMND1Q9NWS8 449 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 CGNQ9P2M7 1197 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 MRTO4Q9UKD2 239 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 TSPAN16Q9UKR8 245 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 DIMT1Q9UNQ2 313 aaKnown RBP3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 SBF2Q86WG5 1849 aa3.55□□□□□ -1.84
HMGB3P6-201ENST00000444896 LRRC37AA6NMS7 1700 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 STX10O60499 249 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 UFL1O94874 794 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 MELTFP08582 738 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 GNA11P29992 359 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 CNN1P51911 297 aaKnown RBP3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 PPP2R5CQ13362 524 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 CYLC2Q14093 348 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms