RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ABCB7O75027 752 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MITFO75030 526 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 GNAO1P09471 354 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 OSMP13725 252 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 RORAP35398 523 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 PDX1P52945 283 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 RPP38P78345 283 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 MVKQ03426 396 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CD47Q08722 323 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 LAPTM4AQ15012 233 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 EXOSC7Q15024 291 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 DECR1Q16698 335 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FLYWCH1Q4VC44 716 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TRIM61Q5EBN2 209 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 BORAQ6PGQ7 559 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF730Q6ZMV8 503 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FRRS1Q6ZNA5 592 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TMEM151BQ8IW70 566 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CMIPQ8IY22 773 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CYP4Z2PQ8N1L4 340 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 OR1L3Q8NH93 324 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FAM81AQ8TBF8 368 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MYDGFQ969H8 173 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SLC35B4Q969S0 331 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TSC22D3Q99576 134 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TUBA1CQ9BQE3 449 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF559Q9BR84 538 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SOX17Q9H6I2 414 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 POLR1BQ9H9Y6 1135 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TESQ9UGI8 421 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 TMEM5Q9Y2B1 443 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 PCDHGA8Q9Y5G5 932 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CLCA3PQ9Y6N3 262 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DSPPQ9NZW4 1301 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 AGAP5A6NIR3 686 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 KHNYNO15037 678 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 POLR1CO15160 346 aaPredicted RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 KIAA0513O60268 411 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CLIC3O95833 236 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 PDGFBP01127 241 aaPredicted RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 HPGDP15428 266 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CBLP22681 906 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CSTF2P33240 577 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS50-205ENST00000441602 PGDP52209 483 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CRISP1P54107 249 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 MAT1AQ00266 395 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 BNC1Q01954 994 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 SHBQ15464 509 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 ELAVL1Q15717 326 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 TMEM44Q2T9K0 475 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CYP27C1Q4G0S4 372 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 RNF220Q5VTB9 566 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TCTN3Q6NUS6 607 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 ARHGEF39Q8N4T4 335 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 METTL27Q8N6F8 245 aaPredicted RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 ZNF527Q8NB42 609 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TMEM52Q8NDY8 209 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 BPIFB6Q8NFQ5 453 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TEX47Q8TBZ9 253 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 ZNF566Q969W8 418 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CTHRC1Q96CG8 243 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 HRASLS5Q96KN8 279 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 HS6ST2Q96MM7 605 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 SLC46A1Q96NT5 459 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 GTPBP2Q9BX10 602 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 TRIM2Q9C040 744 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 NDEL1Q9GZM8 345 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CCDC90BQ9GZT6 254 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 SAP130Q9H0E3 1048 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 PNO1Q9NRX1 252 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 ACAD8Q9UKU7 415 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 MKLN1Q9UL63 735 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 NDRG4Q9ULP0 352 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 PCDHGA5Q9Y5G8 931 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TDRD6O60522 2096 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 MDC1Q14676 2089 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 A0A1W2PS29 197 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 IRGMA1A4Y4 181 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 SH3PXD2BA1X283 911 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TRAPPC13A5PLN9 417 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 C17orf105B2RV13 164 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 H3BN98 237 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 J3KTA2 159 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 PCDH17O14917 1159 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 HRO43593 1189 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CYP7B1O75881 506 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 CBX7O95931 251 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 NID1P14543 1247 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 AGXTP21549 392 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 ELAVL4P26378 380 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 POU1F1P28069 291 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 RFX3P48380 749 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 IDH2P48735 452 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 ALDH6A1Q02252 535 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 SRSF5Q13243 272 aaKnown RBP5.61□□□□□ -1.51
VPS50-205ENST00000441602 CDK5R2Q13319 367 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 RAPSNQ13702 412 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 TUBA3CQ13748 450 aa5.61□□□□□ -1.51
VPS50-205ENST00000441602 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms