RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GTPBP3Q969Y2 492 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 DGAT2Q96PD7 388 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ELF4Q99607 663 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 DOK1Q99704 481 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 DUSP23Q9BVJ7 150 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SAP130Q9H0E3 1048 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 DUSP21Q9H596 190 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ANKRA2Q9H9E1 313 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 C14orf105Q9NVL8 296 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SEMA5BQ9P283 1151 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 MMACHCQ9Y4U1 282 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 NUP210LQ5VU65 1888 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 IGHV5-51A0A0C4DH38 117 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 FAM227AF5H4B4 570 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 PCDHGA12O60330 932 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 FMO6PO60774 539 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 SEMA7AO75326 666 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 WBP4O75554 376 aaKnown RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 NKX2-2O95096 273 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 CBX7O95931 251 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 CCNYL3P0C7X3 344 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 CHMP24386 653 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 EPHA2P29317 976 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MAP3K8P41279 467 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 STT3AP46977 705 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 TMBIM6P55061 237 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 DMWDQ09019 674 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MGAT2Q10469 447 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 PMS2P3Q13401 168 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 SEC23BQ15437 767 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 NPTX1Q15818 432 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 XAF1Q6GPH4 301 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 VRK2Q86Y07 508 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 OR52R1Q8NGF1 315 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 SLC7A13Q8TCU3 470 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 RAB2BQ8WUD1 216 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 APH1BQ8WW43 257 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 DIO2Q92813 273 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 TMIGD2Q96BF3 282 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 PEX11GQ96HA9 241 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 OR1F2PQ96R84 312 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 SDF2Q99470 211 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 RSPO3Q9BXY4 272 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 RBCK1Q9BYM8 510 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 PRRG3Q9BZD7 231 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 QRSL1Q9H0R6 528 aaKnown RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MAN2C1Q9NTJ4 1040 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 PAK1IP1Q9NWT1 392 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 TESQ9UGI8 421 aaKnown RBP12.28□□□□□ -0.44
CPSF4-206ENST00000441580 MUTYHQ9UIF7 546 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 ADAMTS20P59510 1910 aa12.28□□□□□ -0.44
CPSF4-206ENST00000441580 TMEM150CB9EJG8 249 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 H3BSA7 217 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 TOX3O15405 576 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 XPNPEP2O43895 674 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 OR2B3O76000 313 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 GASTP01350 101 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 CT62P0C5K7 136 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 NID1P14543 1247 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 PNLIPP16233 465 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 SOX18P35713 384 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 GSSP48637 474 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 PSMD4P55036 377 aaKnown RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 EEF1A1P68104 462 aaKnown RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 ILKQ13418 452 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 LSAMPQ13449 338 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 EXOSC7Q15024 291 aaKnown RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 TBCEQ15813 527 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 SLX4IPQ5VYV7 408 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 PODNL1Q6PEZ8 512 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 WDR74Q6RFH5 385 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 MED25Q71SY5 747 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 OLIG3Q7RTU3 272 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 RABEPKQ7Z6M1 372 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 ERI1Q8IV48 349 aaKnown RBP12.27□□□□□ -0.45
CPSF4-206ENST00000441580 D2HGDHQ8N465 521 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 MORN4Q8NDC4 146 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 RHOXF1Q8NHV9 184 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 PIGXQ8TBF5 258 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 GPR151Q8TDV0 419 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 OIT3Q8WWZ8 545 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 RIT1Q92963 219 aa12.27□□□□□ -0.45
CPSF4-206ENST00000441580 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms