RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 WDR87Q6ZQQ6 2873 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ZNF106Q9H2Y7 1883 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CEP192Q8TEP8 1941 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 A0A1B0GVM2 712 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TMEM129A0AVI4 362 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SMAD6O43541 496 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 SLC19A2O60779 497 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TP53P04637 393 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 HSD3B1P14060 373 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 HSD3B2P26439 372 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TIA1P31483 386 aaKnown RBP eCLIP8.06□□□□□ -1.12
HPS4-206ENST00000439453 HNF1BP35680 557 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 NNMTP40261 264 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 B4GALNT1Q00973 533 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 BAMBIQ13145 260 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CDKN3Q16667 212 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ITPRIPL2Q3MIP1 535 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TMEM196Q5HYL7 178 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CXorf57Q6NSI4 855 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CHST9Q7L1S5 443 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 MARCH9Q86YJ5 346 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ADGRF3Q8IZF5 1079 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 APOBEC4Q8WW27 367 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 SCMH1Q96GD3 660 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 LMLNQ96KR4 655 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 BRF2Q9HAW0 419 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SEMA3GQ9NS98 782 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SCML1Q9UN30 329 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ZDBF2Q9HCK1 2354 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 LANCL1O43813 399 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 MPC2O95563 127 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 H1F0P07305 194 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 ELK1P19419 428 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 HLA-FP30511 346 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SLC6A11P48066 632 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 RAB14P61106 215 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 HSF2Q03933 536 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 DSG2Q14126 1118 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 LGALSLQ3ZCW2 172 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 SLC25A30Q5SVS4 291 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ASTLQ6HA08 431 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 THOC6Q86W42 341 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CXorf40BQ96DE9 158 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TM6SF2Q9BZW4 377 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 EXTL2Q9UBQ6 330 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 GFYI3L273 518 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 OR56A5P0C7T3 313 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 MPC1LP0DKB6 136 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TDGF1P13385 188 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ICAM2P13598 275 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SSTR2P30874 369 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SOAT1P35610 550 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ZNF81P51508 661 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 AP1S2P56377 157 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 GINS1Q14691 196 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SPIN4Q56A73 249 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TMEM31Q5JXX7 168 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 LY6G5CQ5SRR4 150 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 GRHL2Q6ISB3 625 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ARSKQ6UWY0 536 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 KIAA1324Q6UXG2 1013 aaKnown RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 GPR26Q8NDV2 337 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CEP76Q8TAP6 659 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 NEIL3Q8TAT5 605 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RBPMSQ93062 196 aaKnown RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 RNFT2Q96EX2 444 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RBP7Q96R05 134 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RNF32Q9H0A6 362 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ABCG5Q9H222 651 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 OR51J1Q9H342 316 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 FGF20Q9NP95 211 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 SPHK2Q9NRA0 654 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 FKBP7Q9Y680 259 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 DMXL1Q9Y485 3027 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 H0YIV9 168 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 K7EQS6 105 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SEMA7AO75326 666 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CISD3P0C7P0 127 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 PRKACAP17612 351 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CXCL3P19876 107 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SOX18P35713 384 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CD79BP40259 229 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 DGKGP49619 791 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 DSTNP60981 165 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 MC1RQ01726 317 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SP140Q13342 867 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SPDYE7PQ495Y7 208 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 CD276Q5ZPR3 534 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ACSM5Q6NUN0 579 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TCTN3Q6NUS6 607 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CPXM2Q8N436 756 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RFT1Q96AA3 541 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 ZNF578Q96N58 590 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 TEFMQ96QE5 360 aaKnown RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms